HMMER2.0 [2.3.2] NAME Family.Ciliate-D1.protein LENG 8 ALPH Amino RF no CS no MAP yes COM /opt/Bio/hmmer/bin/hmmbuild -f -n Family.Ciliate-D1.protein ./Family.Ciliate-D1.protein.hmm ./Family.Ciliate-D1.protein.aln COM /opt/Bio/hmmer/bin/hmmcalibrate ./Family.Ciliate-D1.protein.hmm NSEQ 126 DATE Mon Sep 13 15:39:38 2010 CKSUM 5565 XT -8455 -4 -1000 -1000 -8455 -4 -8455 -4 NULT -4 -8455 NULE 595 -1558 85 338 -294 453 -1158 197 249 902 -1085 -142 -21 -313 45 531 201 384 -1998 -644 EVD -6.681551 1.001863 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d b->m m->e -12 * -6955 1 -1947 -82 269 64 -99 -2745 1318 -559 723 -34 -4672 1452 -1041 1890 -678 -344 -723 -656 -5767 264 52329 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -107 -12216 -13259 -894 -1115 -701 -1378 -1012 -3814 2 -1596 -1125 310 629 593 -5111 508 446 609 215 -1598 1152 -1044 848 -925 367 -1098 -654 280 -498 52330 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -115 -12225 -13267 -894 -1115 -701 -1378 -3819 -3708 3 -1954 -5564 59 -308 -409 -1108 -3769 854 1424 -748 -1434 100 -721 1345 -669 820 -1127 -464 308 719 52331 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -125 -12246 -13288 -894 -1115 -701 -1378 -3819 -3594 4 -623 -161 33 -833 -59 -1095 -467 1222 473 378 -586 765 -1628 1749 -3996 356 -1616 -1868 294 -117 52332 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -137 -12258 -13300 -894 -1115 -701 -1378 -3819 -3470 5 -1443 -274 -347 353 577 -1469 -1424 424 466 -733 26 903 -1035 1554 -657 368 -199 -1117 -5766 1118 52333 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -151 -12272 -13314 -894 -1115 -701 -1378 -3819 -3335 6 -1961 -1086 -635 310 1154 -2013 -1262 638 1427 -288 -4678 474 -1580 1644 -587 -318 -57 -2845 883 -8 52334 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -168 -12289 -13331 -894 -1115 -701 -1378 -3819 -3186 7 -1985 -1013 -340 381 -73 -2774 -1312 943 814 -742 -663 1824 -2416 1666 -3881 461 -170 -808 -5724 -972 52335 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -190 -12311 -13353 -894 -1115 -701 -1378 -3819 -3020 8 -1222 -123 -634 -341 614 -2830 543 1413 1026 -416 -4659 1590 -2530 478 -1448 295 -2343 60 -5758 -61 52336 - * * * * * * * * * * * * * * * * * * * * - * * * * * * * -3819 0 //