HMMER2.0 [2.3.2] NAME Group.PKL.KD LENG 2 ALPH Amino RF no CS no MAP yes COM /opt/Bio/hmmer/bin/hmmbuild -f -n Group.PKL.KD ./Group.PKL.KD.hmm ./Group.PKL.KD.aln NSEQ 65 DATE Mon Sep 20 14:47:21 2010 CKSUM 9862 XT -8455 -4 -1000 -1000 -8455 -4 -8455 -4 NULT -4 -8455 NULE 595 -1558 85 338 -294 453 -1158 197 249 902 -1085 -142 -21 -313 45 531 201 384 -1998 -644 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d b->m m->e -36 * -5358 1 624 -4036 859 -191 -854 133 1111 -1315 -750 -320 19 -329 -3701 1065 518 48 -1793 -225 1960 96 2739 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -586 -11070 -12112 -894 -1115 -701 -1378 -1036 -1000 2 -32 2230 775 971 82 -803 1051 -1795 -61 -4096 -27 -1185 -1150 364 423 -1115 227 535 -4268 392 2740 - * * * * * * * * * * * * * * * * * * * * - * * * * * * * -1036 0 //