Gene Y48B6A.10 (Nematode worm)
Y48B6A.10
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| Y48B6A.10.AA | Protein | Genbank | 474 | None | Fasta, JSON |
| Y48B6A.10.kin_dom | Protein Kinase Domain | Sugen global kinase HMM prediction | 174 | Kinase domain by global Sugen HMM | Fasta, JSON |
Protein domains of Y48B6A.10.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | Y48B6A.10.AA | Haspin | 235-416 | 30 | 4.9e-77 | 262.23 | In-house | 1-216 (264) | Show / Hide |
Range on Protein: 235-416 Range on HMM: 1-216/264 Sequence Identity: 30% (65 aa) LEQKLGGGIAGDAFNCTWKGLERVAKIIPLHPSHR-------------NKKAFQEVAALNRLGDVAHQ--TPNLVKFEMAAVVTGMP---QDVKNQLREN ...|.| |. |..|..||.| |.| ||||.|.|.. |..|..|.......|...|. .|| ..| ...|||..| ....|..... NCKKIGEGCYGEVFSVTWNGKEVVMKIIPIHWSCCKYYGEYCGEHQQTNDEALNEIIIMKKMGKLSHRNMCPNFPNFCGMCVVTQVPGKCCKKLNKMWDH WRTNH---------------MLVVILSRGGRPVASQPPDSLTAQQSIGIMKQFVMTMLIGETSLKLYHNDAHCRNVLLT-DTDDEYLEYKPDGGAVKVKS ....| ....|...||||.........|..|.|.||.|.||.| |........||| |..|||.. .|....|.|..|| ..|.|| YCYTHHSENDRPDFFKKNQLHIHWIMEYGGRPLDNFRWKFNTCNQCISIMCQLVMSMYIAKDEMQFWHNDLHWGNVLIKRKTKKKWLHYTMDGKTIKIKS YEKKLTIIDFGEATFD .....|||||...... HGVMVTIIDFCKSRCG |
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| Kinase | Y48B6A.10.AA | SrcA | 233-278 | 41 | 7e-06 | 14.07 | In-house | 1-45 (250) | Show / Hide |
Range on Protein: 233-278 Range on HMM: 1-45/250 Sequence Identity: 41% (19 aa) IELEQKLGGGIAGDAFNCTWKGLERVAKIIPLHPSHRNKKAFQEVA |.||..|| | |. . || | .|| | | | .|| | | IRLERRLGQGCFGEVWMGTWNGTTKVA-IKTLKPGTMSPEAFLEEA |
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| Kinase | Y48B6A.10.AA | SFK-Src | 233-259 | 44 | 0.000135 | 8.88 | In-house | 1-27 (259) | Show / Hide |
Range on Protein: 233-259 Range on HMM: 1-27/259 Sequence Identity: 44% (12 aa) IELEQKLGGGIAGDAFNCTWKGLERVA |.||.||| | || . .| . || IRLEKKLGSGQFGDVWKGRWNNTTEVA |
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| Kinase | Y48B6A.10.AA | Abl | 233-295 | 28 | 0.000182 | 10.26 | In-house | 1-59 (252) | Show / Hide |
Range on Protein: 233-295 Range on HMM: 1-59/252 Sequence Identity: 28% (18 aa) IELEQKLGGGIAGDAFNCTWKGLERVAKIIPLHPSHRNKKAFQEVAALNRLGDVAHQTPNLVK | ...||||| |. .. || . . . |. . . | . ||. . .. | ||||. IMMKHKLGGGQYGEVYEGVWKRHDCTVAVKTLKEDTMEVHEFLKEAAI--MKEMKH--PNLVQ |
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