Gene YLR253W (Bakers Yeast)
YLR253W
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| YLR253W.AA | Protein | Refseq_NP | 569 | Hypothetical ORF; Ylr253wp [Saccharomyces cerevisiae] | Fasta, JSON |
| YLR253W.kin_dom | Protein Kinase Domain | Sugen global kinase HMM prediction | 301 | Kinase domain by global Sugen HMM | Fasta, JSON |
Protein domains of YLR253W.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | YLR253W.AA | ABC1-B | 166-289 | 43 | 6.4e-71 | 241.92 | In-house | 1-125 (125) | Show / Hide |
Range on Protein: 166-289 Range on HMM: 1-125/125 Sequence Identity: 43% (57 aa) EDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFP------DYPLTWLGDELQSSIYVELN .||| ||| | ||...||. ||||||| |||. . |..||||.|||.|......|.|.........|.||| ..|..|..||.|.....||. KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLH---D-GETVAVKVQHPWLRKQFHYDMMMMELFVKVCDWFFPKSPDFKEFPFMWFHDEIQKNLPQELD FTKEAENAEKTRHYFSKFKKQTALKIPKVI |..||.||||.|..|.|||....|..|... FYNEARNAEKCRQMFKKFKHFDFLYVPRIH |
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| Kinase | YLR253W.AA | ABC1 | 166-289 | 41 | 3.1e-61 | 209.76 | In-house | 1-123 (123) | Show / Hide |
Range on Protein: 166-289 Range on HMM: 1-123/123 Sequence Identity: 41% (53 aa) EDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFP-----DYPLTWLGDELQSSIYVELNF .||| .|| | ||...|.. ||.|||| |||| . |..||||.|||...|.|. |......|....|.||| ...|.|..||.|.....|..| QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLK---D-GQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDF TKEAENAEKTRHYFSKFKKQTALKIPKVI ..||.||||.|..|.|| .......|... NNEARNAEKCRQLFKKF-HWPFFYVPRIH |
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| Kinase | YLR253W.AA | ABC1 | 166-289 | 37 | 1.9e-55 | 188.7 | Pfam | 1-126 (126) | Show / Hide |
Range on Protein: 166-289 Range on HMM: 1-126/126 Sequence Identity: 37% (48 aa) EDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFPD-----YPLTWLGDELQSSIYVELNF |.||. .|..| ||...||. ||.|||| |.||.. |. ||||.||| .|. ...|....| ...... |||. . |.|. ||...... ||.. EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDD---GEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDY TKEAENAEKTRHYFSKFKKQTALKIPKVI . ||.|.|..|. | ....|.....|||. RREAKNMERFRENFRHWHRQPWVYVPKVY |
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