SCYL3

Species: Human
Alias: LOC57147, PACE-1, PACE1, SCYL3, RP1-97P20.2
External Links: iHOP , Entrez Gene , Refseq cDNA , Refseq Protein , Phosphosite , GeneCards
Annotation: Consensus chromosomal location: 1q23-q24,

Classification

Group: Other
Family: SCY1

Sequence

Name Sequence Type Origin Length Description Download
SCYL3.NA RNA Sugen Kinome 3477 None Fasta, JSON
SCYL3.AA Protein Sugen Kinome 742 None Fasta, JSON
SCYL3.kin_dom Protein Kinase Domain Sugen Kinome 221 None Fasta, JSON

Protein domain

Protein domains of SCYL3.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase SCYL3.AA SCY1 18-245 21 4.3e-82 279.04 In-house 1-337 (337) Show / Hide
Range on Protein: 18-245
Range on HMM: 1-337/337
Sequence Identity: 21% (71 aa)

FTLPSGLAVYPAVLQDGKFASVF--------VYKRENEDKVNKAAKHLKTLRHPCLLRFLSCTVEADG--IHLVTERVQPLEVALETLSS----------
 .. .| ..|... .. ......        ....|......|.||.||.||||..|.......| .   .....|..|||| .|.....          
WKIHNGTKKYTGQECSVFVFDKKNIEKWHKDSWWEEICEFLKKQAKRLKRLRHPNILQYIHPLEESKDCMMYATEEIFQPLENVLKKWDNKKSCQTQKTQ

-----------------------AEVCAGIYDILLALIFLHDRGHLTHNNVCLSSVFVSEDGHWKLGG---------METVCKVSQATPEFLRSIQSIR-
                       .|||.||..|| ||.|||...|..|||.| .|.|| ..|.||.||         |..||......|.... ... . 
DVDFGQNTQPQRPYHKKDWKLDELEVCWGIFQILDALSFLHNDCHMVHNNICPESIFVNKNGDWKIGGDDDDAGGWGMDFVCDIQNGNPQMPWFPCQEWR

------------DPASIPPEEMSPEFTTLPECHG-----------------HARDAFSFGTLVESLLTILN----EQVSA-------------------D
            |....||....|...  ...|.                 .|.| ||.|.|.........    .. ..                   |
EMDYISVSSTKPDNKYPPPCQPNPDWLAPEYIHEDQHTPASYNWGQEQKCTWASDMFSLGCLIWWVYNGKKPQITCNSNPYSTFHRYMEQWNAMSHCWWD

VLSSFQQTL----HSTLLNPIPKCRPALCTLLSHDFF
 . .. |..    ...||.. |.||| ....|.|..|
HIPKELQEHLGHCYCHLLHQDPTCRPDPQQFLQHCYF

Kinase SCYL3.AA S_TKc 25-245 14 5e-06 -88.57 SMART 1-231 (231) Show / Hide
Range on Protein: 25-245
Range on HMM: 1-231/231
Sequence Identity: 14% (38 aa)

AVYPAVLQDGKFASVFVYKRENEDKVNKAAK-----------HLKTLRHPCLLRFLSCTVEADGIHLVTERVQ----PLEVALET---------LSSAEV
     ..  | |..|.  .  . ..   | |            ||  .|| . ... . .. | ...|.| .      |   ..          ..  ..
YEILRKIGKGAFGKVYKCRHKK-TGRIVAIKIIKEHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HA

CAGIYDILLALIFLHDRGHLTHNNVCLSSVFVSEDGHWKLGGMETVCKVSQATPEFLRSIQSIRDPASIPPEEMSPEFTTLPECHGH-ARDAFSFGTLVE
.  .| |..|| ..|.. .  |  .  . ....|  | |..     ...               .     |. |.||       .|. . |  |.| .. 
RFYMYQICCALEYCHSH-GIIHRDLKPENILLDE--HIKICDFGLARQL---------------TTFCGTPWYMAPEVL----GYGKCKCDWWSCGCILY

SLLT----------ILNEQVSADVLSSFQQTLHSTLLNPIPKCRPALCTLLS-------HDFF
 .|.          ...  .     ... . . . .|.  |. ||    .|        | .|
EMLCGYPPFPQMQMMFKKIG----SPEAKD-FIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF

Kinase SCYL3.AA PLK 225-245 42 3e-05 13.17 In-house 238-258 (258) Show / Hide
Range on Protein: 225-245
Range on HMM: 238-258/258
Sequence Identity: 42% (9 aa)

LLNPIPKCRPALCTLLSHDFF
.||. |  || .  .|.|.||
MLNWNPDERPTIDQILQHPFF

Kinase SCYL3.AA PLK2 223-245 43 6.5e-05 11.45 In-house 235-257 (257) Show / Hide
Range on Protein: 223-245
Range on HMM: 235-257/257
Sequence Identity: 43% (10 aa)

STLLNPIPKCRPALCTLLSHDFF
. .| | |. || |  .. ||||
ARMLSPDPEDRPSLDHIIRHDFF

HEAT SCYL3.AA HEAT 338-368 22 0.067091 10.44 Pfam 1-31 (31) Show / Hide
Range on Protein: 338-368
Range on HMM: 1-31/31
Sequence Identity: 22% (7 aa)

VIPVLLQLFEVHEEHVRMVLLSHIEAYVEHF
..|.||....  ...||.  .. . . .||.
ILPHLLKCLNDPDWEVREAACWCLGQLCEHC

HEAT SCYL3.AA HEAT 377-407 25 0.005506 14.2 Pfam 1-31 (31) Show / Hide
Range on Protein: 377-407
Range on HMM: 1-31/31
Sequence Identity: 25% (8 aa)

ILPQVLLGLRDTSDSIVAITLHSLAVLVSLL
||| .| .|.|..... . .. .|..|.. .
ILPHLLKCLNDPDWEVREAACWCLGQLCEHC