Gene SLOB2 (Slime mold)

SLOB2

Species: Slime mold
Alias: DDB0229843, SLOB2, DdisK131
External Links: DictyBase Link ,
Annotation:

Classification

Group: Other
Family: Slob

Sequence

Name Sequence Type Origin Length Description Download
SLOB2.AA Protein None 574 None Fasta, JSON
SLOB2.kin_dom Protein Kinase Domain None 177 None Fasta, JSON

Protein domain

Protein domains of SLOB2.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase SLOB2.AA Slob 131-307 38 5.4e-111 375.05 In-house 50-268 (268) Show / Hide 
Range on Protein: 131-307
Range on HMM: 50-268/268
Sequence Identity: 38% (84 aa)

FRTIIKSLEIHPFISVPLLVDFIPEKHVAVSVRPFYADRGSLRDFIHKSKPKMPYADKYDT----------------HLQLN---EKIVSKFGRQILEAL
|..|..|........|..||.||..||....|..|...||||.|||.|.|||||.|.||..                |...|   .|.|.|..|||||||
FMKILMSCHHPYIYPVINLVFFINHKHNYCCVIRFFNKRGSLKDFIYKAKPKMPWARKYCNKQPKSSSSSSSSSSSSHKKQNGLPMKQVQKYCRQILEAL

IFLKNHNFPYFHLNSANVLVDD--QICLISDYENSFLGLEPRFSDFIRQHN---EKIDPDVLSFGLVLFEMACGYEMENP------------------HS
|||....|||.||.|.||..||  ..|..||.||..||..|...|.|..|.   |....||..||..|.||.|||.|.|.                  |.
IFLHSKGFPYGHLHSGNVMIDDSNDCCRLSDIENCLLGMPPFYNDYIMWHRKIHEIENVDVYCFGHCLYEMCCGYPMQNHSVRNFPPCPFIALFCDKEHI

VDISIPAHCYPEVRKVLEA
....|..||.|..|..|..
LSCEICKHCMPTMRQLLQM
S_TKc SLOB2.AA S_TKc 75-328 18 0.000188 -111.62 SMART 1-231 (231) Show / Hide 
Range on Protein: 75-328
Range on HMM: 1-231/231
Sequence Identity: 18% (51 aa)

YSLQDKIPK--FGSRSDKVYFGVLGNSLNKLENDRIMAMVPVSKHWPIPLNSEAGRTTFRTIIKSLEIHPFISVPLLVDFIPEKHVAVSVRPF----YAD
| . .|| |  ||    ||| ..  .       .||.|.  ..                ..|.. ..|.     | .| ..   .     . .    |.|
YEILRKIGKGAFG----KVYKCRHKK------TGRIVAIKIIK----------------EHIRREIQILKK-HHPNIVKLYDVFQD---DHLYMVMEYCD

R--GSLRDFIHKSKPKMPYADKYDTHLQLNEKIVSKFGRQILEALIFLKNHNFPYFHLNSANVLVDDQICLISDYENSFLGLEPRFSDF-----------
   |.|.|.|.| ... ..        ...|  . .. .||..|| .. .|.. .  |  .|.|.|.    |.|   . .      . |           
GDLGDLFDYIKKRGRHGLR-------FPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-HIKICDFGLARQL-----TTFCGTPWYMAPEV

IRQHNE-KIDPDVLSFGLVLFEMACGYEMENPHSVDISIPAHCYPEVRKVLEAIFKPFYGTPITLEELSK-------MDFF
. ...  |.  |. |.| .|.||.|||     .   .       ||..  .. ...      .|  |. .       . .|
L-GYGKCKC--DWWSCGCILYEMLCGYPPFP-QMQMMFKKIG-SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase SLOB2.AA TKL 166-241 17 0.000472 10.5 In-house 119-198 (364) Show / Hide 
Range on Protein: 166-241
Range on HMM: 119-198/364
Sequence Identity: 17% (17 aa)

YADRGSLRDFIHKSKPKMPYADKYDTHLQLNEKIVSKFGRQILEALIFLKNHN--------FPYFHLNSANVLVDDQI---------------CLISDY
|...|||....|                        .. ..|  .. .| ..|          .  |.|.|.|||.                 | |.|.
YCPGGSLLHYLH-------------------WHQRCRWALDIARGMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDF