Gene 14263 (Tetrahymena)

14263

Species: Tetrahymena
Alias: 3825.m02650, 991, TTHERM_00030320, PreTt14263, 2.m02073, 14263
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-B

Sequence

Name Sequence Type Origin Length Description Download
14263.AA Protein None 518 None Fasta, JSON
14263.kin_dom Protein Kinase Domain None 118 None Fasta, JSON
14263.NA RNA None 1557 None Fasta, JSON

Protein domain

Protein domains of 14263.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 14263.AA ABC1-B 119-236 49 5.9e-76 258.65 In-house 1-125 (125) Show / Hide 
Range on Protein: 119-236
Range on HMM: 1-125/125
Sequence Identity: 49% (62 aa)

EDLGSNPEDIFEEFEQEPVASASIAQVHRAKLKTGETVAVKIQKPNIQKQFGYDMFMHKLFLQVLEYAF-------DLPLTPFHESIEENLAKEIDFNIE
.||| |.||.|.||.|.|.|.||.||||||||..|||||||.|.|...|||.|||.|..||..|....|       ..|...||..|..||..|.||..|
KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMMMMELFVKVCDWFFPKSPDFKEFPFMWFHDEIQKNLPQELDFYNE

AENSKKCKILFQKL-GRKEIYVPNIY
|.|..||...|.|. .....|||.|.
ARNAEKCRQMFKKFKHFDFLYVPRIH
Kinase 14263.AA ABC1 119-236 43 5e-69 235.64 In-house 1-123 (123) Show / Hide 
Range on Protein: 119-236
Range on HMM: 1-123/123
Sequence Identity: 43% (54 aa)

EDLGSNPEDIFEEFEQEPVASASIAQVHRAKLKTGETVAVKIQKPNIQKQFGYDMFMHKLFLQVLEYAF------DLPLTPFHESIEENLAKEIDFNIEA
.||| |.||.|.||...|.|.||||||||||||.|.|||||.|.|....|..||..............|      ...|..|.......|..|.|||.||
QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEA

ENSKKCKILFQKLGRKEIYVPNIY
.|..||..||.|......|||.|.
RNAEKCRQLFKKFHWPFFYVPRIH
Kinase 14263.AA ABC1 119-236 36 4e-42 143.9 Pfam 1-126 (126) Show / Hide 
Range on Protein: 119-236
Range on HMM: 1-126/126
Sequence Identity: 36% (46 aa)

EDLGSNPEDIFEEFEQEPVASASIAQVHRAKLKT-GETVAVKIQKPNIQKQFGYDMFMHKLFLQVLEYAFDL------PLTPFHESIEENLAKEIDFNIE
|.|| ..|.||.||..||.|.|||||||||.||. ||.||||.| |...|..  |. . ........  |         |.   . ...||..|.|.  |
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRRE

AENSKKCKILFQKL-GRKEIYVPNIY
|.|..... .| ..  ....||| .|
AKNMERFRENFRHWHRQPWVYVPKVY
Kinase 14263.AA ABC1-A 132-161 66 8.8e-13 40.75 In-house 1-30 (216) Show / Hide 
Range on Protein: 132-161
Range on HMM: 1-30/216
Sequence Identity: 66% (20 aa)

FEQEPVASASIAQVHRAKLKTGETVAVKIQ
||  | | ||| |||.| || |  ||||||
FEEMPFACASIGQVHQAVLKDGREVAVKIQ
Kinase 14263.AA CK1 287-320 25 3e-05 14.38 In-house 152-195 (339) Show / Hide 
Range on Protein: 287-320
Range on HMM: 152-195/339
Sequence Identity: 25% (11 aa)

GFTHADPHPGNLLVRRNPQ----------DTQKQQIVLLDYGLC
|| | |  |.|... ||..          . .. |....|.|..
GFIHRDIKPDNFCMGRNESFKYGKHHHEWNNEHRQVYMIDFGMA
Kinase 14263.AA ABC1-C 283-300 66 0.000296 8.66 In-house 129-146 (307) Show / Hide 
Range on Protein: 283-300
Range on HMM: 129-146/307
Sequence Identity: 66% (12 aa)

IFITGFTHADPHPGNLLV
||.  | ||| ||||.||
IFVDNFVHADLHPGNILV