Gene 23657 (Tetrahymena)

23657

Species: Tetrahymena
Alias: 23657, PreTt23657, 988, TTHERM_01197150, 271.m00046
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-B

Sequence

Name Sequence Type Origin Length Description Download
23657.AA Protein None 519 None Fasta, JSON
23657.kin_dom Protein Kinase Domain None 123 None Fasta, JSON
23657.NA RNA None 1560 None Fasta, JSON

Protein domain

Protein domains of 23657.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 23657.AA ABC1-B 144-266 54 5.5e-82 278.69 In-house 1-125 (125) Show / Hide 
Range on Protein: 144-266
Range on HMM: 1-125/125
Sequence Identity: 54% (69 aa)

KDIGKIEDVFSEFDKEAIAAASLAQVHRAKLKKNGQEVAVKIQFPFLRTQTHYDLTVISQIVKLCDWFLQKSPDFKNIKMHDQFSNFQKVLLEELNFYNE
||.|.|||||||||...||||||||||||||.. |..||||.|.|.||.|.|||.......||.||||..||||||...........||.|..||.||||
KDLGNIEDVFSEFDQKPIAAASLAQVHRAKLHD-GETVAVKVQHPWLRKQFHYDMMMMELFVKVCDWFFPKSPDFKEFPFMWFHDEIQKNLPQELDFYNE

RSNADLTREQFK---NYDQLYIPQYF
..||...|..||   ..|.||.|...
ARNAEKCRQMFKKFKHFDFLYVPRIH
Kinase 23657.AA ABC1 144-266 48 1.1e-70 241.12 In-house 1-123 (123) Show / Hide 
Range on Protein: 144-266
Range on HMM: 1-123/123
Sequence Identity: 48% (61 aa)

KDIGKIEDVFSEFDKEAIAAASLAQVHRAKLKKNGQEVAVKIQFPFLRTQTHYDLTVISQIVKLCDWFLQKSPDFKNIKMHDQFSNFQKVLLEELNFYNE
.|.|..||||||||....||||.|||||||||. ||.||||.|.|..|.|.|||.......||.|||| .. ||||..........|||.| .|..|.||
QDLGNWEDVFSEFDEKPFAAASIAQVHRAKLKD-GQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPG-PDFKWFFLMWFVDEFQKELPWECDFNNE

RSNADLTREQFK--NYDQLYIPQYF
..||. .|..||  .....|.|...
ARNAEKCRQLFKKFHWPFFYVPRIH
Kinase 23657.AA ABC1 144-266 33 4.2e-29 100.13 Pfam 1-126 (126) Show / Hide 
Range on Protein: 144-266
Range on HMM: 1-126/126
Sequence Identity: 33% (43 aa)

KDIG-KIEDVFSEFDKEAIAAASLAQVHRAKLKKNGQEVAVKIQFPFLRTQTHYDLTVISQIVKLCDWFLQKSPDFKNIKMHDQFSNFQKVLLEELNFYN
.. | ..|..|.|||.| |||||.||||||.|| .|.|||||.| | .. .   |.  .  ..|. . |    .   . ...     |.| | .||.. .
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRR-QRFDLMWIVDEFRKNLPWELDYRR

ERSNADLTREQFKNY---DQLYIPQYF
|  |.. .|| |...   . .|.|. .
EAKNMERFRENFRHWHRQPWVYVPKVY
Kinase 23657.AA ABC1-A 156-188 57 1.3e-09 29.72 In-house 1-32 (216) Show / Hide 
Range on Protein: 156-188
Range on HMM: 1-32/216
Sequence Identity: 57% (19 aa)

FDKEAIAAASLAQVHRAKLKKNGQEVAVKIQFP
|     |.||  |||.| | | |.||||||| |
FEEMPFACASIGQVHQAVL-KDGREVAVKIQYP
Kinase 23657.AA NinaC 158-188 41 0.000493 11.64 In-house 4-34 (267) Show / Hide 
Range on Protein: 158-188
Range on HMM: 4-34/267
Sequence Identity: 41% (13 aa)

KEAIAAASLAQVHRAKLKKNGQEVAVKIQFP
 | |.    . | ..| |.||| .||||| .
YETIGKGTYGKVFKVKNKDNGQIAAVKIQHY
Kinase 23657.AA CAMK1 167-185 22 0.000636 7.22 In-house 13-34 (276) Show / Hide 
Range on Protein: 167-185
Range on HMM: 13-34/276
Sequence Identity: 22% (5 aa)

AQVHRAKLKKN---GQEVAVKI
..|.... |..   |...|.|.
SEVYLCTHKETQTNGKQYAIKC
Kinase 23657.AA ABC1-A 255-285 35 0.145195 1.52 In-house 93-123 (216) Show / Hide 
Range on Protein: 255-285
Range on HMM: 93-123/216
Sequence Identity: 35% (11 aa)

KNYDQLYIPQYFHDNMSQRVLTMEFVRGVKI
|.    |.|  .    . |||||| . |. |
KDWPFFYVPHVIDEYCTDRVLTMELMYGFPI