Gene 29028 (Tetrahymena)

29028

Species: Tetrahymena
Alias: PreTt29028, 77.m00240, 29028, TTHERM_00577410, 3812.m02716, 222
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-D1

Sequence

Name Sequence Type Origin Length Description Download
29028.AA Protein None 371 None Fasta, JSON
29028.kin_dom Protein Kinase Domain None 189 None Fasta, JSON
29028.NA RNA None 1116 None Fasta, JSON

Protein domain

Protein domains of 29028.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc 29028.AA S_TKc 23-274 17 3e-11 -11.89 SMART 1-231 (231) Show / Hide 
Range on Protein: 23-274
Range on HMM: 1-231/231
Sequence Identity: 17% (47 aa)

LSQSNYIAEGRLGRVYSYIKKKTGEAFAVQIMQNLDRQTRFNVMEEIRTIYSEIHTRKGGQLETYS---LHLIME-IGY---SLLHIMKQQPD------M
    . | .|  |.||  ..||||. .|. |.         ... ||.   .  |      ....    |...|| ..    .|....|...       .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK-------EHIRREIQILKK-HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPF

SMKDILYHFKNIIKIIVKLHSNKLYHGNLKPQNILYIEEKNSIGGKTKKLKFSGFFNTKKGQKTYT---PYTPKDLVSQWKNYDRINGNYLL-LGDIYSI
.  .. . .. |.. .  .||..  |  |||.|||  |           .| . |   ..  .|.     | .  ..            |     |..|.
PE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE----------HIKICDFGLARQL-TTFCGTPWYMAPEVL-----------GYGKCKCDWWSC

GMIIICMCLNKHKVLEDHLDPEQLLDNLKVKVEQKLYSNDLFLLLKDMVDEDPEKRPSYKDVQE------KLKII
| |.. |.  .        ..........        | ..  ... . . ||||||.  .. .      .   .
GCILYEMLCGYPPFP----QMQMMFKKIG--------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase 29028.AA Ciliate-E1 29-203 16 1.4e-07 21.28 In-house 1-202 (202) Show / Hide 
Range on Protein: 29-203
Range on HMM: 1-202/202
Sequence Identity: 16% (34 aa)

IAEGRLGRVYSYIKKKTG-EAFAVQIMQNLDRQT----------RFNVMEEIR-TIYS-EIHTRKGGQLETYSLHLIMEIGYSLLHIMK-----------
|..|  ..|.  .....  .  |..| .  . ..           ...|. ..  .|. .|   .  ..   .. ....  .||.  ..           
IGNGSFSIVFKAKQQNNNYNQVAQKIINCCFNYNQNHFQDEIKEYYKIMK-FKKECYIIQIIDYIKIDQNYICIIIFECCCCSLKDYLQNHNRLEYWQQC

--QQPDMSMKDILYHFKNIIKIIVKLHSNKLYHGNLKPQNILYIEEKNSIGGKTKKLKFSGFFNTKKGQKT-YTPYTPKDLVSQWKN---YDRINGNYLL
  .| ... . ... ....|. .  ||.....|...||||||.  ..| .     ..  | |.. .. | . |. || .   .. .|   .   | |.  
QQNQNQFTFQQKMQIIFQLIDGLIELHQYNIIHRDIKPQNILINNQGNYVYC---DFGISKFLKNNQNQQCQYKGYTHYYYPPEQYNCPEQ-EHNKNQKI

--LGDIY
    |||
NYKSDIY
Kinase 29028.AA TKL 201-271 18 6.7e-07 20.89 In-house 271-364 (364) Show / Hide 
Range on Protein: 201-271
Range on HMM: 271-364/364
Sequence Identity: 18% (17 aa)

DIYSIGMIIICMCLNKHKVLEDHLDPEQLL----DNLKVKVEQKL-------------------YSNDLFLLLKDMVDEDPEKRPSYKDVQEKL
|.|| |...  ..  ..   ... .|...     . ... .. .|                      ..  |..|  |.||||||| ... ..|
DVYSFGIVLWEILTRCRPYYDYPYMPMIFQDPFEEMFMMVCDKGLRPPIPPIWQNHHKMCPCPDCPPSMKKLMQDCWDHDPEKRPSFQEILKRL
Kinase 29028.AA NAK-Unclassified 242-273 40 1.1e-05 15.46 In-house 374-405 (405) Show / Hide 
Range on Protein: 242-273
Range on HMM: 374-405/405
Sequence Identity: 40% (13 aa)

YSNDLFLLLKDMVDEDPEKRPSYKDVQEKLKI
|||.|  | |.|. |||  ||.   | ... .
YSNQLHNLIKIMLNEDPIQRPNIYQVLNHICQ
Kinase 29028.AA NAK 242-271 36 1.2e-05 14.78 In-house 270-299 (299) Show / Hide 
Range on Protein: 242-271
Range on HMM: 270-299/299
Sequence Identity: 36% (11 aa)

YSNDLFLLLKDMVDEDPEKRPSYKDVQEKL
||...  | ..| ..|||.||.  .| ..|
YSQQMHDLIRYMLTPDPEQRPNIYQVLNQL
Kinase 29028.AA Ciliate-E2b 96-144 21 1.6e-05 12.96 In-house 84-134 (272) Show / Hide 
Range on Protein: 96-144
Range on HMM: 84-134/272
Sequence Identity: 21% (11 aa)

GYSLLHIMKQQP--DMSMKDILYHFKNIIKIIVKLHSNKLYHGNLKPQNIL
| .|. .. ..    .| .| .  .. |....  ||...  .. .|| ||.
GMELFDVIREIGRLLLSTYDSQFYIASICLCLEYLHNQNIIYRDIKPENIM
Kinase 29028.AA TKL-ciliate1 240-271 18 4.3e-05 13.38 In-house 248-279 (279) Show / Hide 
Range on Protein: 240-271
Range on HMM: 248-279/279
Sequence Identity: 18% (6 aa)

KLYSNDLFLLLKDMVDEDPEKRPSYKDVQEKL
. ..  .  |.... ...| |||.   . . |
FDCPQNFHNLMMRCWCQNPNKRPNFNEIIQIL
Kinase 29028.AA RGC 255-273 40 6.4e-05 13.48 In-house 281-300 (300) Show / Hide 
Range on Protein: 255-273
Range on HMM: 281-300/300
Sequence Identity: 40% (8 aa)

DEDPEKRPS-YKDVQEKLKI
.||||.||.  . ....|| 
AEDPEERPDMFDQIRKQLKT
Kinase 29028.AA RGC 255-273 40 6.9e-05 13.48 In-house 281-300 (300) Show / Hide 
Range on Protein: 255-273
Range on HMM: 281-300/300
Sequence Identity: 40% (8 aa)

DEDPEKRPS-YKDVQEKLKI
.||||.||.  . ....|| 
AEDPEERPDMFDQIRKQLKT
Kinase 29028.AA Ciliate-A5 128-144 47 0.000103 12.37 In-house 115-131 (275) Show / Hide 
Range on Protein: 128-144
Range on HMM: 115-131/275
Sequence Identity: 47% (8 aa)

LHSNKLYHGNLKPQNIL
|..|...||...||||.
LQQNNICHGDIRPQNIC
Kinase 29028.AA Ciliate-E3 118-144 33 0.000561 8.63 In-house 109-135 (202) Show / Hide 
Range on Protein: 118-144
Range on HMM: 109-135/202
Sequence Identity: 33% (9 aa)

FKNIIKIIVKLHSNKLYHGNLKPQNIL
...||. .  .|. .. |. .||.|||
CIQIIQGMIAIHEKNIIHSDIKPDNIL
Kinase 29028.AA Ciliate-A5 200-271 24 0.00061 9.66 In-house 199-275 (275) Show / Hide 
Range on Protein: 200-271
Range on HMM: 199-275/275
Sequence Identity: 24% (19 aa)

GDIYSIGMIIICMCLNKHK---VLEDHL---DPEQLLDNLKVKVEQKLYSNDLFLLLKDMVDEDPEKRPSYKDVQEKL
.|....|||.  ||.       ....     . .||.. |  ..|.| ||. .  ..| |   ...|||.  . .. |
SDVFCLGMICLEMCTMRDCTQFYYDYETFQIQNNQLIKQLIQMKEKK-YSEQFINFIKQMLQFEENKRPDFHQIYQYL
Kinase 29028.AA TKL-ciliate1 128-148 52 0.007902 5.51 In-house 119-141 (279) Show / Hide 
Range on Protein: 128-148
Range on HMM: 119-141/279
Sequence Identity: 52% (12 aa)

LHSNK--LYHGNLKPQNILYIEE
||...  | | .|| ||||| |.
LHMRQNPLIHRDLKMQNILYDEP
Kinase 29028.AA Ciliate-E3 201-213 38 0.016319 4.0 In-house 190-202 (202) Show / Hide 
Range on Protein: 201-213
Range on HMM: 190-202/202
Sequence Identity: 38% (5 aa)

DIYSIGMIIICMC
|.||.| ... .|
DYYSVGAVFCQLC
Kinase 29028.AA TKL 128-144 36 0.025732 4.16 In-house 148-172 (364) Show / Hide 
Range on Protein: 128-144
Range on HMM: 148-172/364
Sequence Identity: 36% (9 aa)

LHSNK--------LYHGNLKPQNIL
|||..        . | .||..|||
LHSMNPKWCTKPPIIHRDLKSKNIL
Kinase 29028.AA RGC 129-142 64 0.207125 1.0 In-house 103-116 (300) Show / Hide 
Range on Protein: 129-142
Range on HMM: 103-116/300
Sequence Identity: 64% (9 aa)

HSNKLYHGNLKPQN
||   ||||||. |
HSPIRYHGNLKSWN
Kinase 29028.AA RGC 129-142 64 0.216043 1.0 In-house 103-116 (300) Show / Hide 
Range on Protein: 129-142
Range on HMM: 103-116/300
Sequence Identity: 64% (9 aa)

HSNKLYHGNLKPQN
||   ||||||. |
HSPIRYHGNLKSWN