Gene 33987 (M.brevicollis)

33987

Species: M.brevicollis
Alias: 33987
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: SH2-R-HYR

Sequence

Name Sequence Type Origin Length Description Download
33987.AA Protein None 4580 None Fasta, JSON

Protein domain

Protein domains of 33987.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

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Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Sod_Cu 33987.AA Sod_Cu 2010-2043 28 0.00058 13.64 Pfam 1-38 (161) Show / Hide 
Range on Protein: 2010-2043
Range on HMM: 1-38/161
Sequence Identity: 28% (11 aa)

AEAHLM----GKGISGHIYFEQLTADAPVSVRVNIEDL
| . |.    |  ..| ..|.|  .| || ....|. |
AVCVLKPAGSGGKVVGTVTFTQTGYDGPVHITGDITGL
Sod_Cu 33987.AA Sod_Cu 2117-2148 19 0.100283 6.37 Pfam 106-161 (161) Show / Hide 
Range on Protein: 2117-2148
Range on HMM: 106-161/161
Sequence Identity: 19% (11 aa)

LDHTLSLFSAH--SVV----GRSVVLLQN--DV----------------PLTCGNI
.|. ..|. ..  |..    |||.|  ..  |                  . ||.|
TDPRITLWGGYPNSIIFDDDGRSIVIHAGPDDYGRGGHEMSQPTGNAGARIACGVI
Sod_Cu 33987.AA Sod_Cu 2396-2429 26 2.417092 1.88 Pfam 89-130 (161) Show / Hide 
Range on Protein: 2396-2429
Range on HMM: 89-130/161
Sequence Identity: 26% (11 aa)

GNL-VI-DSSSTARSVFQDPDLPLRGSA--SVS----GKTLV
.|. .  |.  .|.  | ||.. | | .  |.     |...|
PNIHYVWDADGVAKVDFTDPRITLWGGYPNSIIFDDDGRSIV
Sod_Cu 33987.AA Sod_Cu 2451-2480 35 0.001564 12.24 Pfam 1-34 (161) Show / Hide 
Range on Protein: 2451-2480
Range on HMM: 1-34/161
Sequence Identity: 35% (12 aa)

AEAYFD----LGNVRGLVTFTQDGPTNPVSVSAE
| . ..     |.|.| |||||.|.  || ....
AVCVLKPAGSGGKVVGTVTFTQTGYDGPVHITGD
Sod_Cu 33987.AA Sod_Cu 2566-2604 24 0.001238 12.57 Pfam 100-161 (161) Show / Hide 
Range on Protein: 2566-2604
Range on HMM: 100-161/161
Sequence Identity: 24% (15 aa)

VASMSLVDNDITLFGQH--SIV----GRALALVNSGT-----------------AKISCANI
|| .. .|..|||.| .  ||.    ||..    ..                  | | |..|
VAKVDFTDPRITLWGGYPNSIIFDDDGRSIVIHAGPDDYGRGGHEMSQPTGNAGARIACGVI
Sod_Cu 33987.AA Sod_Cu 2728-2748 25 7.047186 0.37 Pfam 126-161 (161) Show / Hide 
Range on Protein: 2728-2748
Range on HMM: 126-161/161
Sequence Identity: 25% (9 aa)

GKSIVVYND---F------------AASSRVACGTL
|.|||.  .   .             | .|.|||. 
GRSIVIHAGPDDYGRGGHEMSQPTGNAGARIACGVI
Sod_Cu 33987.AA Sod_Cu 2838-2882 15 1.833387 2.27 Pfam 79-129 (161) Show / Hide 
Range on Protein: 2838-2882
Range on HMM: 79-129/161
Sequence Identity: 15% (8 aa)

SDDNCAIGDFSGR-FT-TAEDLVEMQHVYTDRFLSLYGPA--TVA----GRAF
.|... .||.    .   |.  ...  .... ...|.|..   .     ||..
NDEGRHAGDLPNIHYVWDADGVAKVD-FTDP-RITLWGGYPNSIIFDDDGRSI
SKG6 33987.AA SKG6 3929-3964 22 0.000395 17.83 Pfam 1-40 (40) Show / Hide 
Range on Protein: 3929-3964
Range on HMM: 1-40/40
Sequence Identity: 22% (9 aa)

ASGSGRLSTGAAIGLGV--GIFVLLFVVV--FVIWWFKCR
 . . ...|..||..||  .. |.. |..  . .||....
KPTDKHWKTTVAIACGVVIPVGVIILVLICFLFCWWRRKK
SH2 33987.AA SH2 4480-4568 30 7.2e-12 46.67 SMART 1-87 (87) Show / Hide 
Range on Protein: 4480-4568
Range on HMM: 1-87/87
Sequence Identity: 30% (27 aa)

RRYVHGALSRTEADSMLTRAGGEAGTFLVRARKG-TQQYVLSLALSGGKGEHHVLERGPTGAWQINGSATTKPCTTLEALVQHLSQTADI
  . || .|| ||...| . |.. |.|||| .    ..||||.    ||  | ...| ..| . | .. . ... .|  ||.| ..... 
QPWYHGNISREEAEQLLKNPGMPDGDFLVRDSESNPGDYVLSVRWK-GKVKHYRIRRNDDGKYYIDET-WRRKFPSL-ELVNHYQHNPLG
SH2 33987.AA SH2 4482-4562 33 1.2e-10 33.1 Pfam 1-81 (81) Show / Hide 
Range on Protein: 4482-4562
Range on HMM: 1-81/81
Sequence Identity: 33% (28 aa)

YVHGALSRTEADSMLTRAGGEAGTFLVRARKGTQ-QYVLSLALSG--GKGEHHVLERGPTGAWQINGSATTKPCTTLEALVQHL
. || .|| ||  .|   |.. |||||| .  |. .|.||.   |   . .| .  | ..| . | |  .   . .|  ||.| 
WYHGKISRQEAERLLMNPGNPDGTFLVRESESTPGDYTLSVRDDGPGDRVKHYRIQRTDNGGYYITGRHK---FCSLQELVEHY