Gene CC1G_08873 (C.cinerea)

CC1G_08873

Species: C.cinerea
Alias: CC1G_08873
External Links:
Annotation:

Classification

Group: Atypical
Family: Alpha
Subfamily: Alpha-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CC1G_08873.AA Protein None 635 None Fasta, JSON
CC1G_08873.NA RNA None 1908 None Fasta, JSON
CC1G_08873.kin_dom Protein Kinase Domain None 246 None Fasta, JSON

Protein domain

Protein domains of CC1G_08873.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_08873.AA Alpha_kinase 487-566 34 7e-13 45.73 Pfam 151-225 (225) Show / Hide 
Range on Protein: 487-566
Range on HMM: 151-225/225
Sequence Identity: 34% (30 aa)

CDAFAHFSLDDSDGSVVFVDIQGIDSSTLPITSGIPLNVAHSVTLFDVMIHSSDGVY------GLGDQGWTGIRDFVT-QHKCNTIC
. || ||.   |.|  . .|||| .     . ...       . | |  ||. || |      |.|..|  ||. |.  ||||| ||
MQAFSHFTYHRSNGQMMVCDIQGVG-----Y-NNK------CYYLTDPQIHTKDGNYEMDFDEGMGNLGQEGIEKFFQNQHKCNHIC
Kinase CC1G_08873.AA Alpha-Unclassified 480-566 20 3.3e-11 32.63 In-house 135-215 (215) Show / Hide 
Range on Protein: 480-566
Range on HMM: 135-215/215
Sequence Identity: 20% (19 aa)

SDLAGRTCDAFAHFSLDDSDGSVVFVDIQG-ID---SSTLPITSGIPLNVAHSVTLFDVMIHSSDGVYG--LGDQGWTGIRDFVTQH--KCNTIC
.. |.  | .. |..   . .. . .| || .|   . |.  |              |. ||. .  |.   .. | ..|  .   |  .|| .|
EYEAYQYCCTYQHWTYQWTNHCDIVCDLQGWVDENDKKTWKMT--------------DPQIHTIRQRYQGFKTNCGMRFIDYWFNNHHVQCNHYC
Kinase CC1G_08873.AA Alpha 533-566 29 8.1e-09 21.07 In-house 175-215 (215) Show / Hide 
Range on Protein: 533-566
Range on HMM: 175-215/215
Sequence Identity: 29% (12 aa)

DVMIHS-----SDGVYGLGDQGWTGIRDFVTQH--KCNTIC
|. ||.      . ..| |. | .|.. |   |  .|| .|
DPQIHCPAKLDQGMKFGDGNCGYEGMFRFFYTHHVQCNHYC
Kinase CC1G_08873.AA VWL 543-571 41 2.3e-07 18.08 In-house 178-206 (206) Show / Hide 
Range on Protein: 543-571
Range on HMM: 178-206/206
Sequence Identity: 41% (12 aa)

YGLGDQGWTGIRDFVTQHKCNTICAKLGL
.| |. |  |.  |   |.|| .|.|| |
FGQGNLGYEGMLRFFMTHQCNKYCQKLQL
Alpha_kinase CC1G_08873.AA Alpha_kinase 344-566 15 3e-06 -16.5 SMART 1-255 (255) Show / Hide 
Range on Protein: 344-566
Range on HMM: 1-255/255
Sequence Identity: 15% (45 aa)

SAVWVEEQEPFKVVVDKESFASGVTKKAVKMYIDK----------KKYAAKYFYDIDGSGAVSHKDNLVHLKDELLRGHILE-------------VAAEK
.  |..     |.  .. .|| |   .. .  .|           ....|||| ..                   .. .  .              ....
DNKWTCQETCVKI-KEPKPFAKGAMRWCYW-GCDWSEHMHCFCHGWECVAKYFKKEYKRTW--------------DEERYFHETLHLCLRDVEMQMMCKH

FVKSARHAKISTYDIRGPAESFI-LTVVEGP---------SKGRA----------------WLVDPLFE-------------NAVMRKFSGTDLAGANSD
...  .  ..  . ....  .|| ..|.. |         ...                  ... |. |             |. ||. . |  .     
WAN--EFNQEAQHNPCPKKIDFIPCYVFHFPRRIPAEYDRNIPYWFSYRTTDQMMVMCCCIFHMEPFMEGEFVKYNNNNGWVNDCMRWTT-T-SQ-R-RT

LAGRTCDAFAHFSLDDSDGSVVFVDIQGI----DSSTLPITSGIPLNVAHSVTLFDVMIHSSD---GVYGLGDQGWTGIRDFVTQHKCNTIC
 ..  | || |... .| .. . .||||     ..  |             ... |. ||. |     .| |  | .||. |. .|.|| ||
EMFEYCQAFSHWTYEWSNHQMLVCDIQGVIHKNGD--L-------------YYYTDPQIHTEDQNGYGFGMGNLGQEGIEKFFQTHQCNQIC
Kinase CC1G_08873.AA Alpha 480-511 27 0.002237 5.3 In-house 137-169 (215) Show / Hide 
Range on Protein: 480-511
Range on HMM: 137-169/215
Sequence Identity: 27% (9 aa)

SDLAGRTCDAFAHFSLDDSDGSVVFVDIQ-GID
.. .. .. || |..   | |. . ||.| |..
DNEFNQLMQAFSHWTWQYSNGQLMVVDLQWGVG
Kinase CC1G_08873.AA VWL 489-509 47 0.082636 1.28 In-house 138-158 (206) Show / Hide 
Range on Protein: 489-509
Range on HMM: 138-158/206
Sequence Identity: 47% (10 aa)

AFAHFSLDDSDGSVVFVDIQG
|| ||.   | |    ||.||
AFSHFTWQYSQGYCMIVDLQG