Gene CC1G_05545 (C.cinerea)

CC1G_05545

Species: C.cinerea
Alias: CC1G_05545
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
CC1G_05545.AA Protein None 706 None Fasta, JSON
CC1G_05545.NA RNA None 2121 None Fasta, JSON
CC1G_05545.kin_dom Protein Kinase Domain None 1 None Fasta, JSON

Protein domain

Protein domains of CC1G_05545.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HAMP CC1G_05545.AA HAMP 253-306 22 0.004022 17.4 SMART 1-53 (53) Show / Hide 
Range on Protein: 253-306
Range on HMM: 1-53/53
Sequence Identity: 22% (12 aa)

KLLKAQVQDVARVCNAVARGDLSQKITVPVQGVVMVQLKDVINGMVDKLGQFAK
. . . ....... ...|.|||...|.|   .  . ||   .| |.|.| . . 
RRITRPLRRLTQAMQRIADGDLTVRIPVDG-RDEIGQLARAFNQMADRLRETIR
HAMP CC1G_05545.AA HAMP 253-303 18 0.294055 7.73 Pfam 21-78 (78) Show / Hide 
Range on Protein: 253-303
Range on HMM: 21-78/78
Sequence Identity: 18% (11 aa)

KLLKAQVQDVARVCNAVARGDLSQKITVPVQGVV--------MVQLKDVINGMVDKLGQ
. . . .. .... ...|.|||...|. . .  .        . ||   .| |.|.| .
RRITRPLRRLTQAMQRIADGDLDVRIE-YGRDRIRPVPGPDEIGQLARAFNQMRDRLRE
HAMP CC1G_05545.AA HAMP 346-398 33 1.1e-11 46.08 SMART 1-53 (53) Show / Hide 
Range on Protein: 346-398
Range on HMM: 1-53/53
Sequence Identity: 33% (18 aa)

ANLTNQVRSIAKVTKAVALGDLSKQIEVDARGEILDLKNTVNGMVVRLRALAA
 ..|  .| ........| |||.. |.|| |.|| .|  ..| |. |||....
RRITRPLRRLTQAMQRIADGDLTVRIPVDGRDEIGQLARAFNQMADRLRETIR
HAMP CC1G_05545.AA HAMP 344-395 30 1.4e-08 34.76 Pfam 19-78 (78) Show / Hide 
Range on Protein: 344-395
Range on HMM: 19-78/78
Sequence Identity: 30% (18 aa)

LAANLTNQVRSIAKVTKAVALGDLS-------KQI-EVDARGEILDLKNTVNGMVVRLRA
|| ..|  .| ........| |||.         | .|. ..|| .|  ..| |. |||.
LARRITRPLRRLTQAMQRIADGDLDVRIEYGRDRIRPVPGPDEIGQLARAFNQMRDRLRE
HAMP CC1G_05545.AA HAMP 438-490 26 1.7e-10 42.1 SMART 1-53 (53) Show / Hide 
Range on Protein: 438-490
Range on HMM: 1-53/53
Sequence Identity: 26% (14 aa)

SSLTDQVRSIAMVTTAVARGDLTQKITIQVEGEMSTLKGTVNSMVDQLSAFAS
 ..|  .| .. .. ..|.||||..|... ..|.  |  ..|.|.|.| . . 
RRITRPLRRLTQAMQRIADGDLTVRIPVDGRDEIGQLARAFNQMADRLRETIR
HAMP CC1G_05545.AA HAMP 439-487 22 1e-06 27.59 Pfam 22-78 (78) Show / Hide 
Range on Protein: 439-487
Range on HMM: 22-78/78
Sequence Identity: 22% (13 aa)

SLTDQVRSIAMVTTAVARGDLT-------QKI-TIQVEGEMSTLKGTVNSMVDQLSA
..|  .| .. .. ..|.|||.       . | ...  .|.  |  ..|.|.|.|..
RITRPLRRLTQAMQRIADGDLDVRIEYGRDRIRPVPGPDEIGQLARAFNQMRDRLRE
HAMP CC1G_05545.AA HAMP 530-582 26 1e-07 32.87 SMART 1-53 (53) Show / Hide 
Range on Protein: 530-582
Range on HMM: 1-53/53
Sequence Identity: 26% (14 aa)

SNLTDQVRSISEVTKAVAAGDLTKLVNVDVQGEMLDLKMTVNSMVSQLSTLAN
 ..|  .| ........|.||||. . || ..|. .|  ..|.|. .| ... 
RRITRPLRRLTQAMQRIADGDLTVRIPVDGRDEIGQLARAFNQMADRLRETIR
HAMP CC1G_05545.AA HAMP 528-579 21 2.5e-07 30.1 Pfam 19-78 (78) Show / Hide 
Range on Protein: 528-579
Range on HMM: 19-78/78
Sequence Identity: 21% (13 aa)

MASNLTDQVRSISEVTKAVAAGDLT-------KLV-NVDVQGEMLDLKMTVNSMVSQLST
.| ..|  .| ........|.|||.         .  |. ..|. .|  ..|.|. .|..
LARRITRPLRRLTQAMQRIADGDLDVRIEYGRDRIRPVPGPDEIGQLARAFNQMRDRLRE
HAMP CC1G_05545.AA HAMP 639-691 33 1.5e-10 42.34 SMART 1-53 (53) Show / Hide 
Range on Protein: 639-691
Range on HMM: 1-53/53
Sequence Identity: 33% (18 aa)

MNLTNQVRSIAQVTKAVAGGDLTKKIDVDARGEILELKDTVNGMTASLSVFAD
 ..|  .| ..|.....| ||||..|.|| |.|| .|  ..| | ..|   ..
RRITRPLRRLTQAMQRIADGDLTVRIPVDGRDEIGQLARAFNQMADRLRETIR
HAMP CC1G_05545.AA HAMP 636-688 26 2e-08 34.15 Pfam 18-78 (78) Show / Hide 
Range on Protein: 636-688
Range on HMM: 18-78/78
Sequence Identity: 26% (16 aa)

LMAMNLTNQVRSIAQVTKAVAGGDLT-------KKI-DVDARGEILELKDTVNGMTASLSV
..| ..|  .| ..|.....| |||.         | .|. ..|| .|  ..| | ..|. 
WLARRITRPLRRLTQAMQRIADGDLDVRIEYGRDRIRPVPGPDEIGQLARAFNQMRDRLRE