Gene CC1G_13883 (C.cinerea)
CC1G_13883
Species: C.cinerea
Alias: CC1G_13883
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CC1G_13883.AA | Protein | None | 1918 | None | Fasta, JSON |
| CC1G_13883.NA | RNA | None | 5757 | None | Fasta, JSON |
| CC1G_13883.kin_dom | Protein Kinase Domain | None | 262 | None | Fasta, JSON |
Protein domains of CC1G_13883.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.
| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| PI3Ka | CC1G_13883.AA | PI3Ka | 1441-1574 | 20 | 2.7e-21 | 74.82 | Pfam | 70-211 (211) | Show / Hide |
Range on Protein: 1441-1574 Range on HMM: 70-211/211 Sequence Identity: 20% (29 aa) AVRKDLRHLLL--WAPVPPIIANTFFERRYNN-DPMLLQYANRVMAQ-HPVELTFFFIPQVVQALRYD---DLVRLGYVARFIFETAKISQ-LFCHQIIW .| ....... |.|..| | . . . || ||| .. . ... .....| ||||.|. .|..||....|.... .. |...| QVAQAYQLMDCRVWPPIDPCDALELLDCNFPDNCPMVRQYAVKCLESYMSDDELLCYLLQLVQALKYENFDEPFHDSYLSRFLLWRAWQNRQRIGHFFFW NMKANCYKDDAAEIEDPMKPKLDEMTALVVDSLSGEARSFYD .||...|||| ....|.... .. . ...... .. .. YMKSEMYKDDEGHDKDYICQRFGVLLESYCRECGTHMQHLNK |
|||||||||
| PI3Ka | CC1G_13883.AA | PI3Ka | 1390-1578 | 12 | 3.7e-08 | 17.68 | SMART | 1-232 (232) | Show / Hide |
Range on Protein: 1390-1578 Range on HMM: 1-232/232 Sequence Identity: 12% (30 aa) QVDPAV--AIFFQERFQYAG-------VRHEVGRLVRTGT-TSVLDVPEAL-------LVLLGDRLDPA-VRKDLRHLLLW--APVPPIIANTFFERRYN .| .. . ..... | .|... .. ..|.|| . . . .. | ... .. | .|..| | .. ... DYDLKPRWNEEERDQLEDIMKYPPTYELTEEEKDLIWKFRHYYLTNHPKALPSMCFPKFLRCVNWSWADEVKQAYQLMHQWWWPPIDPEDALELLDPKFP ND--PMLLQYANRVMAQHPVELTFFFIPQVVQALRYDDLV-------------------------RLGYVARFIFETAKISQLFCHQIIWNMKANCYKDD . |. ||| ....| ... .....| ||||.|... ....||... | .. . |...|..|...|... DYNCPHVRQYAVQCLEQMSDDELLHYLLQLVQALKYENFDHIKHHFCEFDQDQSMSMTKEEDGPYHDSPLCRFLLQRALCNPRIGHFFYWYLKSEMYDHC AAEIEDPMKPKLDEMTALVVDSLSGEA-RSFYDREFT . . .. ... ... ... . ..| QLHDPHY-----CQRFGMLLEMYCRGCCGHHMRHLFK |
|||||||||
| PI3Kc | CC1G_13883.AA | PI3Kc | 1656-1914 | 24 | 1.8e-78 | 267.95 | SMART | 1-336 (336) | Show / Hide |
Range on Protein: 1656-1914
Range on HMM: 1-336/336
Sequence Identity: 24% (84 aa)
QAIFKVGDDCRQDVLALQVIAMFKNIFESI----GLTLYLFPYRVTATAPGCGVIDVVPNATSRDEMGR-------------------------------
. |||.|||.||| ...|.. ....| . .. |...||.. .| |.||.| .|||.... .. .
AVIFKCGDDLRQDMRMMQMFRLMNKIWQKDKECRRRDLHMRPYKCIPTGPKCGMIEWVPNCETLHQIQKKYHKWKKMPMDYHQWFMFDMLVPEIQKNMYM
--------------------------------AKVNDLMGFFVAKYGGENTVSFQKARLNFIQSMAAYSVACYILQIKDRHNGNIMID-GEGHIVHIAAC
|...| .|. .....| ....|| ||..|.|.|....|||.|.||||.|||.| .||..||
MIWHQQACHWMMMYQHMTHMEWLKYFEGATCPFKPPVLYDWFWEHFPDPN-EDWWEARDNFTRSCAGYCMVTYILGIGDRHNDNIMLDMKTGHCFHIDF-
AYLTLVALILRPGGVKF-----EPNSFKLNHEMVQLMG--GRYSQGYQLFQSLTVKAFLAIRPYAAQIVDTVQLMLDTGL-PSFKGE-PTIRRLRDRFTL
.. |. ..| | |.| |.|| .|| | |. ...|... ..|..|.| .. .|. ....|..... |..... .|. ||.|| |
----GHIFGHGPKKPGFKHHHRERVPFRLTHDMVYVMGGGGKPSGYFGYFRTCCCRAYRAMRKHSNLIMNLFEMMVYDPIMPCWRMMEKDIKYLRQRFRL
S-LSERQAADYMMG-----VIRNAHENVRSTAYDEFQRLQNG
. ||...|| |.| .|.. .| ...|..|......
DHLSDEEAAQYFMQTMCTKLIEHSNESWTTRMYWMFHNWAQY
|
|||||||||
| PI3_PI4_kinase | CC1G_13883.AA | PI3_PI4_kinase | 1654-1865 | 22 | 5.1e-49 | 173.97 | Pfam | 1-300 (300) | Show / Hide |
Range on Protein: 1654-1865
Range on HMM: 1-300/300
Sequence Identity: 22% (69 aa)
WQQAIFKVGDDCR--QDVLALQVI-----------------------AMFKNIFESIGLTLY----LFPYRVTATAPGCGVIDVVPNATSRDEMGRAKV-
|...|||.|||.| || . .| | ..... . |... ..|||. .|.|.||.| .|||.|. .| | ..
WYPFIFKGGDDLRCRQDMRMMQMICVFKPKDEEPYANNPNKWTMWQHRLMNKCWKKDGCDRRRNMQMQPYRCIPTGPWCGMIEWVPNCTTFHEIPRTYMV
------------------------------------------NDLMGFFVAKYGGENTVSFQKARLNFIQSMAAYSVACYILQIKDRHNGNIMI---DGE
..| .|. ... . . ...|| ||. |.| ..|. |||.. ||||.|||. ..
KCKHKHFNKEHKMWMKMWPDWWHLMRMQKVEVFEMRIMKTPKPGLYQWFWKHNPDA-YEEWWEARDNFVRSCAGMCVVDYILGNGDRHNDNIMVKDDKTT
GHIVHIAACAYLTLVALILR----PGGVKFEPNSFKLNH------EMVQLMGG----RYSQGYQLFQSLTVKAFLAIRPYAAQIVDTV-------QLMLD
||..|| ... ... |.|. |.. | .|| .||| |. |..|... ..|..|.| .. .. . ..|..
GHLFHID-------FGHCFPHWKMKHFHKPERVPFRWTHWPQAKKPMVHAMGGYISLDPSGDYGWFRDYCWHAYRALRRHMNLCMNLLKKAVMRGECMVH
TGLPSFKG
.|||...
DGLPMWRS
|
|||||||||
| Kinase | CC1G_13883.AA | FRAP | 1746-1784 | 50 | 5.3e-07 | 21.93 | In-house | 137-176 (251) | Show / Hide |
Range on Protein: 1746-1784 Range on HMM: 137-176/251 Sequence Identity: 50% (20 aa) RLNFIQSMAAYSVACYILQIKDRHNGNIMIDGE-GHIVHI | |. |.| |.| ||| . ||| |||.. | |||| RTNYTRSLATMSMAGYILGLGDRHPSNIMLQRYTGKIVHI |
|||||||||
| Kinase | CC1G_13883.AA | ATR | 1745-1784 | 39 | 8e-06 | 15.35 | In-house | 163-203 (267) | Show / Hide |
Range on Protein: 1745-1784 Range on HMM: 163-203/267 Sequence Identity: 39% (16 aa) ARLNFIQSMAAYSVACYILQIKDRHNGNIMIDG-EGHIVHI .| |.. |.|.... ||. . ||| ||.|| | .||. SRENYCRSYAVWCMVGYIIGLGDRHTDNILIDKINGECVHV |
|||||||||
| Kinase | CC1G_13883.AA | PIKK | 1745-1784 | 48 | 2.2e-05 | 15.98 | In-house | 185-225 (290) | Show / Hide |
Range on Protein: 1745-1784 Range on HMM: 185-225/290 Sequence Identity: 48% (20 aa) ARLNFIQSMAAYSVACYILQIKDRHNGNIMIDGE-GHIVHI .| |.. | | ... ||| . ||| ||||| . | |||| RRENYTRSYAVMCMVGYILGLGDRHPENIMIDMQTGEIVHI |
|||||||||
| Kinase | CC1G_13883.AA | ATM | 1746-1784 | 42 | 0.000548 | 8.18 | In-house | 137-176 (304) | Show / Hide |
Range on Protein: 1746-1784 Range on HMM: 137-176/304 Sequence Identity: 42% (17 aa) RLNFIQSMAAYSVACYILQIKDRHNGNIMIDGEG-HIVHI || . |.| |. ||| . ||| ||.| .||| RLAYTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHI |
|||||||||