Gene CC1G_15854 (C.cinerea)

CC1G_15854

Species: C.cinerea
Alias: CC1G_15854
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_15854.AA Protein None 777 None Fasta, JSON
CC1G_15854.NA RNA None 2334 None Fasta, JSON
CC1G_15854.kin_dom Protein Kinase Domain None 435 None Fasta, JSON

Protein domain

Protein domains of CC1G_15854.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_15854.AA TAO 422-493 33 0.00012 10.78 In-house 104-165 (254) Show / Hide 
Range on Protein: 422-493
Range on HMM: 104-165/254
Sequence Identity: 33% (24 aa)

ILKQCLTAMRLMYCAGWIHRDISVGNILAIRPGPEAPWEMKLSDLEYARRFLDPEIPKGEKPIGTPFFMACE
| .. | ..| .     |||||  ||||   .|      .||.|   |  . .|     .  .|||..|| |
ICHGALQGLRYLHSHKMIHRDIKAGNILLTEHG-----QVKLADFGSA-SMVCP----ANSFVGTPYWMAPE
S_TKc CC1G_15854.AA S_TKc 261-634 10 0.000152 -110.26 SMART 1-231 (231) Show / Hide 
Range on Protein: 261-634
Range on HMM: 1-231/231
Sequence Identity: 10% (42 aa)

SEFHSDDAVGRSARVWKVKQVFSPTDLRRVPGTSDRI--LKDVSLDARMKPEVDIQRQLFADIAAFGERPDWRSAGVLKDMRQEDMDALVDALDGENFKK
 |..     |  ..|.|.. .            ..||  .| ..                                   .. .  .. |    . .|  |
YEILRKIGKGAFGKVYKCRHKK-----------TGRIVAIKIIK-----------------------------------EHIRREIQILKK--HHPNIVK

YFSCIVASHVGKPYSCPARSQSQSLPFGDGPSPTFVPKRRCFYLYEFICT---PLYDICTLG-----------EAIDILKQCLTAMRLMYCAGWIHRDIS
.. ...                                 . .   |.. .    |.|.               .|  ...| . |.  .   | ||||. 
LYDVFQD-------------------------------DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHARFYMYQICCALEYCHSHGIIHRDLK

VGNILAIRPGPEAPWEMKLSDLEYARRFLDPEIPKGEKPIGTPFFMACELQARVPLIPEEDDPTIDSEEDDDLPEPLRPVSH------------------
  |||  .       . |..|   ||..           .|||..|| |.                            . ..                  
PENILLDE-------HIKICDFGLARQL--------TTFCGTPWYMAPEVL---------------------------GYGKCKCDWWSCGCILYEMLCG

--SYQHDLESIWWIILWLVTARLRAGHSRAWSDTFFKHSRDIHYGQSRYWLLSCGGSLESLAGFPSDLPPSLYGKSFLGHLSAFRFYLCREYRRRYGANG
   .. ... .. .|.                                                      |  .|.|. ..      |... ..|..|  
YPPFP-QMQMMFKKIG------------------------------------------------------SPEAKDFIRKC------LQKDPEKRPTA-E

LED----PGSYSWI
.        .  |.
ALQDEWDIKCHPWF
Kinase CC1G_15854.AA PAKB 424-505 35 0.000202 12.22 In-house 102-177 (252) Show / Hide 
Range on Protein: 424-505
Range on HMM: 102-177/252
Sequence Identity: 35% (29 aa)

KQCLTAMRLMYCAGWIHRDISVGNILAIRPGPEAPWEMKLSDLEYARRFLDPEIPKGEKPIGTPFFMACELQARVPLIPEED
.|.| |.  .   | |||||    ||  . |       ||||  .    .  |.||    .|||. || |. .| |  .| |
RQVLQALAYLHAQGVIHRDIKSDSILLTHDG-----RVKLSDFGFCAQ-VSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD
Kinase CC1G_15854.AA TTBKL 425-443 52 0.000404 9.89 In-house 110-128 (288) Show / Hide 
Range on Protein: 425-443
Range on HMM: 110-128/288
Sequence Identity: 52% (10 aa)

QCLTAMRLMYCAGWIHRDI
||| |...|  .|.||||.
QCLYALKQMHDCGFIHRDV
Kinase CC1G_15854.AA KHS 424-496 31 0.00051 9.26 In-house 103-169 (258) Show / Hide 
Range on Protein: 424-496
Range on HMM: 103-169/258
Sequence Identity: 31% (23 aa)

KQCLTAMRLMYCAGWIHRDISVGNILAIRPGPEAPWEMKLSDLEYARRFLDPEIPKGEKPIGTPFFMACELQA
.. |.... .   | .||||   |||    |     ..|| |   . . .   | |    ||||..|| |  |
RETLQGLHYLHSMGKMHRDIKGANILLTDQG-----DVKLADFGVSAQ-ITATIAKRKSFIGTPYWMAPEVAA