CC1G_12700

Species: C.cinerea
Alias: CC1G_12700
External Links:
Annotation:

Classification

Group: PKL
Family: PKL-Unique

Sequence

Name Sequence Type Origin Length Description Download
CC1G_12700.AA Protein None 722 None Fasta, JSON
CC1G_12700.NA RNA None 2169 None Fasta, JSON
CC1G_12700.kin_dom Protein Kinase Domain None 414 None Fasta, JSON

Protein domain

Protein domains of CC1G_12700.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_12700.AA Ciliate-E2 427-485 22 1.4e-05 15.06 In-house 183-261 (365) Show / Hide
Range on Protein: 427-485
Range on HMM: 183-261/365
Sequence Identity: 22% (20 aa)

VHRDISPGNILAYRESPTSPWAVKLSDLEHAKRFPDP---------QANTKDPI----------------------TGTPPFIACEILDG
.|||| | |||           .|..|.  .|.. |.         . . ..                         |||.. | ||| |
IHRDIKPENILF----------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMF-KNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNG

Kinase CC1G_12700.AA CAMK 427-485 22 0.000142 9.87 In-house 201-294 (425) Show / Hide
Range on Protein: 427-485
Range on HMM: 201-294/425
Sequence Identity: 22% (21 aa)

VHRDISPGNILAYRESPTSP------------WAVKLSDLEHAKRFPDPQANTKDP----------------------ITGTPPFIA-CEILDG
||||. | |||    .. |.            . .|..|   |..|.. . |....                        |||...|  |.| |
VHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNG

Kinase CC1G_12700.AA STE 427-485 24 0.000433 10.48 In-house 174-236 (359) Show / Hide
Range on Protein: 427-485
Range on HMM: 174-236/359
Sequence Identity: 24% (18 aa)

VHRDISPGNILAYRESPTSPWAVKLSDLEHAKRFPD---------------PQANTKDPITGTPPFIACEILDG
.|||| |.|||           |||.|  ..... |                ..   . ..||| . | |....
IHRDIKPANILL----------VKLCDFGVCGQLTDSMANIQSNNIIDCIETMQQKRNTFVGTP-WMAPEVIQQ