Gene NME1B (Mouse)

NME1B

Species: Mouse
Alias: NME1B
External Links:
Annotation:

Classification

Group: NDK
Family: NDK

Sequence

Name Sequence Type Origin Length Description Download
NME1B.AA Protein None 152 None Fasta, JSON
NME1B.NA RNA None 777 None Fasta, JSON
NME1B.kin_dom Protein Kinase Domain None 134 None Fasta, JSON

Protein domain

Protein domains of NME1B.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
NDK NME1B.AA NDK 5-139 61 1.6e-96 331.8 Pfam 1-140 (140) Show / Hide 
Range on Protein: 5-139
Range on HMM: 1-140/140
Sequence Identity: 61% (86 aa)

ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADS--KPG
||||| ||||.|||||.||||.|||.|||..||||......|....|| ..|..||||.||..| ||||||||||| |..|..| |.| ||||..   ||
ERTFIMIKPDAVQRGLIGEIISRFERKGFKIVAMKMMHLTREQAEEHYAEHKGKPFFPDLVEFMTSGPVVAMVWEGENAIKKWREMMGATNPAEAKEAPG

TIRGDFCIQV--GR-NIIHGSDSVESAEKEIHLWFKPEEL
||||||....  || |..|||||.||||.|| .||.|||.
TIRGDFAVSIYPGRRNVVHGSDSPESAEREIAFWFPPEEI
NDK NME1B.AA NDK 4-141 59 1.3e-92 314.86 SMART 1-142 (142) Show / Hide 
Range on Protein: 4-141
Range on HMM: 1-142/142
Sequence Identity: 59% (84 aa)

LERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYI-DLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETN---PADS
.|||||.||||.|||||.|||| |||.|||..||||......|....||  ..|..|||..||..| ||||||||||| |..||.| |.| ||   |...
MERTFIMIKPDAVQRGLIGEIISRFERKGFKIVAMKMMQLTKEQAEEHYAVEHKGKPFFNDLVEFMTSGPVVAMVWEGENAIKTWRTMMGPTNPEVPKEA

KPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELID
 ||||||||....||||.|||||.||||.|| .||...|. .
APGTIRGDFGTDIGRNIVHGSDSPESAEREIAYWFPESEICE