Gene HisK_c (S.moellendorffii)

HisK_c

Species: S.moellendorffii
Alias: HisK_c
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
HisK_c.AA Protein None 465 None Fasta, JSON
HisK_c.NA RNA None 1398 None Fasta, JSON

Protein domain

Protein domains of HisK_c.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HisKA HisK_c.AA HisKA 33-98 41 1.5e-28 102.11 SMART 1-89 (89) Show / Hide 
Range on Protein: 33-98
Range on HMM: 1-89/89
Sequence Identity: 41% (37 aa)

AKSEFLANMSHEIRTPIHAIIGMASLALD----------TNLTEEQ-------------REHLDTVAQSADSLLHIVNTILDLAKIEAG
||..||||||||.|||..||.|.|.|..|          |.|..||             || |.|. ..||......| .|||..||||
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HisKA HisK_c.AA HisKA 33-98 50 2.3e-28 101.79 Pfam 1-69 (69) Show / Hide 
Range on Protein: 33-98
Range on HMM: 1-69/69
Sequence Identity: 50% (35 aa)

AKSEFLANMSHEIRTPIHAIIGMASLALD-TNLTEEQ--REHLDTVAQSADSLLHIVNTILDLAKIEAG
||..||||||||.|||..||.|.|.|..| |.|..||  || |.|. ..|.......| .||...||||
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
HATPase_c HisK_c.AA HATPase_c 145-260 38 2.8e-38 135.43 Pfam 1-120 (120) Show / Hide 
Range on Protein: 145-260
Range on HMM: 1-120/120
Sequence Identity: 38% (49 aa)

GDAGRLQQCILNLVGNAIKFTQR-GSVFLSAKLYTEDDFAVCVLFSVKDTGIGISQ------EKQKEVFKAFSQADT-SITRLYGG--TGLGLSIVERLV
||. ||.| ..|||.||||.|.  | . ....          | ..|.|.|.||.       |..  .| .| ..|  |  | |||  |||||.|. |.|
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-----DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIV

AMMGGRIWLESEAGKGSTFYFAACFD
 ..||.||.||| |.|.|| |   ..
EQHGGTIWVESEPGGGTTFTFTLPLE
HATPase_c HisK_c.AA HATPase_c 145-261 30 1.1e-37 132.47 SMART 1-130 (130) Show / Hide 
Range on Protein: 145-261
Range on HMM: 1-130/130
Sequence Identity: 30% (45 aa)

GDAGRLQQCILNLVGNAIKFTQR--------------GSVFLSAKLYTEDDFAVCVLFSVKDTGIGISQ------EKQKEVFKAFSQADT--------SI
||. ||.| ..||..||||.|.               | . ....            ..|.|.|.||..      |... .| .| ..|         | 
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-----------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSR

TRLYGG--TGLGLSIVERLVAMMGGRIWLESEAGKGSTFYFAACFDR
.| |||  |||||||. |.| ..||.||.|      .||.|     |
SRKYGGGLTGLGLSICKRIVEQHGGTIWVE------TTFTFTLPLER
Kinase HisK_c.AA HisK 145-255 27 3.3e-30 105.58 In-house 1-159 (164) Show / Hide 
Range on Protein: 145-255
Range on HMM: 1-159/164
Sequence Identity: 27% (43 aa)

GDAGRLQQCILNLVGNAIKFTQRG------SVFLSAKLYTEDDF----------------------AVCVLFSVKDTGIGISQEKQKEVFKAFSQAD---
 |  |..| ..||..||.|||| |      .. ...... ...                         .. .||.|||.|...|.||. ||.|.. |   
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNSIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQH

------TSITRL---YGGTGLGLSIVERLVAMMG--------GRIWLESEAGKGSTFYF
      ..  .      | ||||.|  .|. ..|        . | ..|| ||||||.|
QMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSF
REC HisK_c.AA REC 320-456 25 8.3e-26 92.98 SMART 1-150 (150) Show / Hide 
Range on Protein: 320-456
Range on HMM: 1-150/150
Sequence Identity: 25% (44 aa)

MRVLLAEDN----VINQKVAC------QQLRKFGTT--------VEVVGDGE-------QCLSALERDRD-----------RYDLILMDVQVS---FFFP
||.|...|.     .....        . |.| | .        |... |||       . | .|.. ||           ..|||.||..     |   
MRILIVDDDPAMAPVIREMLRNYTVIQRLLEKEGYENKMWMVEVVDEA-DGETLMNEIWEALELLQEHRDKKEDATTDQSEPPDLIIMDIMMPGDPF---

FVLPDLSFLFVQMPVLDGLEATRSIRAQEKLAGYRSKPIIGLTAHAIQGYEDKCIEAGMDAYACKPFRAKQLVDVI
          .    .||.|..| ||           ||| ||||.   .  ...|||.|.| .|||....|...|
----------E-DGGMDGIELCRRIR-----------PIIMLTAHDDEEDRVRALEAGADDYITKPFDPEELLARI
Response_reg HisK_c.AA Response_reg 322-457 29 1.4e-19 72.72 Pfam 1-115 (115) Show / Hide 
Range on Protein: 322-457
Range on HMM: 1-115/115
Sequence Identity: 29% (41 aa)

VLLAEDNVINQKVACQQLR-KFGT-TVEVVGDGEQCLSALERDRDRYDLILMDVQVSFFFPFVLPDLSFLFVQMPVLDGLEATRSIRAQEK-LAGYRSKP
||...|. .....  | |. | |   |... |||..|  ... .  .|||.||                  ..|| .||||..| ||.|..        |
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWWQEHH--PDLIIMD------------------INMPGMDGLELCRRIRRQHPHPQ----TP

IIGLTAHAIQGYEDKCIEAGMDAYACKPFRAKQLVDVIQ
|| .|||.   .  ....||.. |  |||   .|.. |.
IIMCTAHGDEDDAVEALQAGANDYITKPFDPDELHAAIR