Gene HisK_f (S.moellendorffii)

HisK_f

Species: S.moellendorffii
Alias: HisK_f
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
HisK_f.AA Protein None 626 None Fasta, JSON
HisK_f.NA RNA None 1878 None Fasta, JSON

Protein domain

Protein domains of HisK_f.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
MASE1 HisK_f.AA MASE1 91-312 19 4.2e-08 31.57 Pfam 85-322 (322) Show / Hide 
Range on Protein: 91-312
Range on HMM: 85-322/322
Sequence Identity: 19% (46 aa)

FVVASLQAAETYLCSCLLRRFLCLEQSKVVPT--IDSKRDAMLF-FGIVVTISAIFEASVALVAGVGRLVLWADFMPFWMTWWLGVVAGIITVSPFLIHC
...|  ...| ... ..||...  .. .  ..  | . .....| .. .. .. .. ....... .  .. || |  .|.||||| . |...| ||.. .
YAMAMVNTLEAFFGWWWLRWWWPRRHRWQRLQNHIWQRIFWCRFCWFGAIICCLWSAIIGLACLYWFGKIPWAPFAWSWWTWWLGDATGVLVVTPFCYLW

LVWRPQRKFLKP-----AKMVEGFAVMVVTLGLLVVIYTVTIYTYFK-----PLP------YLIFPVILYTSFRFNRLGWALVVASSSLFVAWATVRRKG
  |. || ..       .  |.. ....... .. .. |.. .. .      .||      |...|..|   .||   | ||..  ......|.|    |
WHWWWQRHWWPAWWWFDHHPVACKLLHFFWYLWFCILSTWRQWWCCPFEFNYFLPYTQWTFYCMMPPMLWAAWRFGWQGAALATLLWWVIIIWFTAQGQG

ALYSISGASRVEPRLLIQIELFVSVGALVAISLAAAVREKR
 .   ||...    ... . .|... |..|. ..||..| |
PFNQDSGYQYQ---QAFELQMFLAIQAMTALFMGAAIQEQR
HisKA HisK_f.AA HisKA 356-421 46 3.3e-23 83.84 Pfam 1-69 (69) Show / Hide 
Range on Protein: 356-421
Range on HMM: 1-69/69
Sequence Identity: 46% (32 aa)

AKSDFLANMSHEIRTPIHGILGMSALVLA-TGLTEEQ--RDNMTTVKDCADMLLHLINGILDVAKIEAG
||..||||||||.|||...|.|.. | .. | |..||  |.   |....|. ...||| .|| ..||||
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
HisKA HisK_f.AA HisKA 356-421 37 4e-23 84.07 SMART 1-89 (89) Show / Hide 
Range on Protein: 356-421
Range on HMM: 1-89/89
Sequence Identity: 37% (33 aa)

AKSDFLANMSHEIRTPIHGILGMSALVLA----------TGLTEEQ-------------RDNMTTVKDCADMLLHLINGILDVAKIEAG
||..||||||||.|||...|.|.. | ..          | |..||             |.   |....|| ...||| .|| ..||||
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HATPase_c HisK_f.AA HATPase_c 468-621 30 4.7e-35 124.24 Pfam 1-120 (120) Show / Hide 
Range on Protein: 468-621
Range on HMM: 1-120/120
Sequence Identity: 30% (50 aa)

GDSGKLRHCLLNLVGNALKFTHQ-GYVQVTVAPYVDGLYPSVDPESTDRVMALTERKFVFVPHCTVKNQPRTVSDGAQMKLVFRVSDSGIGVSR------
||   |.. ..|||.||.|.|.. | . |.| .                                               ....|.|.|.|..       
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-------------------------------------------DHVRITVEDNGPGIPPEMHSIA

DKLSNIFKPFTQADP-SISRLYGG--TGLGLCIVQRFVELMGGQICVESEYGTGSTFCILLPFY
.....|| || ..|| |  | |||  ||||| |..|.||..||.| |||| | |.|| . ||. 
EDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIVEQHGGTIWVESEPGGGTTFTFTLPLE
HATPase_c HisK_f.AA HATPase_c 468-622 25 1.1e-34 122.51 SMART 1-130 (130) Show / Hide 
Range on Protein: 468-622
Range on HMM: 1-130/130
Sequence Identity: 25% (47 aa)

GDSGKLRHCLLNLVGNALKFTHQ--------------GYVQVTVAPYVDGLYPSVDPESTDRVMALTERKFVFVPHCTVKNQPRTVSDGAQMKLVFRVSD
||   ||. |.||..||.|.|..              | . |.|                                                  ...|.|
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-------------------------------------------------RITVED

SGIGVSR------DKLSNIFKPFTQADP--------SISRLYGG--TGLGLCIVQRFVELMGGQICVESEYGTGSTFCILLPFYL
.|.|..       .....|| || ..|.        | || |||  ||||| |..|.||..||.| ||      .||.. ||  .
NGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSRSRKYGGGLTGLGLSICKRIVEQHGGTIWVE------TTFTFTLPLER
Kinase HisK_f.AA HisK 551-621 27 1.7e-12 41.75 In-house 74-164 (164) Show / Hide 
Range on Protein: 551-621
Range on HMM: 74-164/164
Sequence Identity: 27% (25 aa)

VSDSGIGVSRDKLSNIFKPFTQAD-----------PSISRL-YGGTGLGLCIVQRFVELMG--------GQICVESEYGTGSTFCILLPFY
|.|.|.| . ... .|||.| . |            .   .   | |||| | .......|        ..| |.||.| |||| ...   
VQDTGCGMPEEQQKKIFKMFGNIDDQHQMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Kinase HisK_f.AA HisK 477-497 44 2e-06 20.2 In-house 10-36 (164) Show / Hide 
Range on Protein: 477-497
Range on HMM: 10-36/164
Sequence Identity: 44% (12 aa)

LLNLVGNALKFTHQG------YVQVTV
|.||..|||||| .|      |. . |
LINLISNALKFTQKGGIPFQGYIKIKV