Gene LRR9_b (S.moellendorffii)

LRR9_b

Species: S.moellendorffii
Alias: LRR9_b
External Links:
Annotation:

Classification

Group: TKL
Family: IRAK
Subfamily: LRR9

Sequence

Name Sequence Type Origin Length Description Download
LRR9_b.AA Protein None 73 None Fasta, JSON
LRR9_b.NA RNA None 222 None Fasta, JSON
LRR9_b.kin_dom Protein Kinase Domain None 67 None Fasta, JSON

Protein domain

Protein domains of LRR9_b.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase LRR9_b.AA TKL 1-70 25 1.1e-16 56.68 In-house 134-239 (364) Show / Hide 
Range on Protein: 1-70
Range on HMM: 134-239/364
Sequence Identity: 25% (27 aa)

KLDIALDIAQGLHYIHYEFD-----STIIHSDFKPENVLLDQDFT--------------ACMTDFGISRLVQ---DSNNIA--------------TVSTF
....|||||.|..| | .         ||| | |..|.|.|...|              .. .|||.|| ..   ..| ..              | .| 
RCRWALDIARGMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQ

KGTIGY
 ||...
CGTPRW
Kinase LRR9_b.AA AGC 23-70 21 4.6e-14 31.27 In-house 175-273 (395) Show / Hide 
Range on Protein: 23-70
Range on HMM: 175-273/395
Sequence Identity: 21% (21 aa)

IIHSD-FKPENVLLDQDFTACMTDFGISRLVQDSN------------------------------------------------NIATVSTFKG--TIGY
||| |  ||||.|||.|   . |||| .  . ...                                                . .. .|| |  |  |
IIHRDYLKPENILLDEDGHIKLTDFGLCKEGMNDGEKGQQSQSNMKFHWHNKKYQKSNMDTNKCNPNNWQRNNMSQEDDTTRKKRDRTWTFCGPCTPEY
Kinase LRR9_b.AA HH498 1-54 40 2.5e-13 38.24 In-house 123-176 (284) Show / Hide 
Range on Protein: 1-54
Range on HMM: 123-176/284
Sequence Identity: 40% (22 aa)

KLDIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISRLVQD
|. |..|.|.|  | |      ||| |    |.|...|  |   |||.|| |.|
KMTISVDVAHGMNYLHNSLKHPIIHRDLNSHNILIHEDGHAVVADFGESRFVCD
Kinase LRR9_b.AA Pkinase 3-71 32 5e-13 47.14 Pfam 112-178 (293) Show / Hide 
Range on Protein: 3-71
Range on HMM: 112-178/293
Sequence Identity: 32% (24 aa)

DIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTA----CMTDFGISRLVQDSNNIATVSTFKGTIGYA
.... |..|| |.| .    ||| | ||||.|.|.. .     . .|||......   |    .|| ||..|.
FYMYQILRGLEYCHSM---GIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFD-Y-NNS-MTTFCGTPWYM
Kinase LRR9_b.AA Dicty4-Unclassified 2-65 38 1.2e-12 39.54 In-house 112-173 (263) Show / Hide 
Range on Protein: 2-65
Range on HMM: 112-173/263
Sequence Identity: 38% (25 aa)

LDIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISRLVQDSNNIATVS-TFK
. .|.|||||. . |      .|| | |  |.|.| .| .   |||||| .    |  |.  | |
IKYAFDIAQGMQHLHTR---NFIHRDIKSSNILMDKHFNIKIADFGISRVIDFNFNMTTIAGTPK
Kinase LRR9_b.AA Dicty5 1-52 38 2.6e-12 38.68 In-house 106-154 (260) Show / Hide 
Range on Protein: 1-52
Range on HMM: 106-154/260
Sequence Identity: 38% (20 aa)

KLDIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISRLV
.| .|.||||.. ..|      ||| | |  |.|.  ....   |||.|| |
QLHMAIDIAQSMRHLH---SMNIIHRDLKSMNFLITENWKIKIIDFGTSRFV
Kinase LRR9_b.AA MLK 1-55 34 1.4e-11 36.57 In-house 126-186 (291) Show / Hide 
Range on Protein: 1-55
Range on HMM: 126-186/291
Sequence Identity: 34% (21 aa)

KLDIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQ------DFTACMTDFGISRLVQDS
....||..|.|.|| |..   .||| | |. |.|.|.      . |.  .|||.|| ....
AMNWALQCARGMHYLHSMAPKPIIHRDLKSHNILIDEICHDMHHGTLKICDFGTSRDWHQM
Kinase LRR9_b.AA Dicty4 4-70 29 3.8e-11 33.6 In-house 117-183 (277) Show / Hide 
Range on Protein: 4-70
Range on HMM: 117-183/277
Sequence Identity: 29% (20 aa)

IALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISRLVQDSNNIAT-VSTFKGTIGY
.|.|.|.|. . | . .. ||| | |. | | |.....  .|||.|.. .   .  .  .| .|| ..
MAFDAARGMNWLH-CCNPVIIHRDLKSHNLLVDKNWRVKVCDFGLSQYMKKHEDHKDNQMTACGTPCW
Kinase LRR9_b.AA ZAK 5-51 41 4.5e-11 35.82 In-house 107-154 (257) Show / Hide 
Range on Protein: 5-51
Range on HMM: 107-154/257
Sequence Identity: 41% (20 aa)

ALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISR-L
| .||.|.|| |..   .||| | |  || .| .      ||| || .
ATQIAKGMHYLHMDAPDKIIHRDLKSRNVVIDKNGVCKICDFGTSRDF
Kinase LRR9_b.AA Ciliate-C7 4-65 30 2e-10 30.13 In-house 107-164 (164) Show / Hide 
Range on Protein: 4-65
Range on HMM: 107-164/164
Sequence Identity: 30% (19 aa)

IALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQDFTACMTDFGISRLVQDSNNIATVSTFK
.| |||||| |||   ..  .  | | .| | |. . | . |||.  .. .     ... . 
YAKDIAQGLYYIH---SKNCVVNDLKMDNILIDYNGNAVVCDFGLADNLTQKS-KYQINQYM
Kinase LRR9_b.AA TKL-Unique 1-71 26 1.7e-09 29.8 In-house 112-193 (290) Show / Hide 
Range on Protein: 1-71
Range on HMM: 112-193/290
Sequence Identity: 26% (22 aa)

KLDIALDIAQGLHYIHYEFDSTIIHSDFKPENVLLDQD-----FTACMTDFGISRLVQ-DSNNIATVS------TFKGTIGYA
....|.|||||..|.| .    ||| | |. |.|.|..     . .   |||.|..   ....... .      |..|.. ..
RVKMAIDIAQGMYYLHHCEPP-IIHRDLKSSNFLVDNNSNIAEWNIKICDFGLSKFNSKINKMTNNEHKGTRNQTRCGSFRWM