Gene SLOB1 (Slime mold)

SLOB1

Species: Slime mold
Alias: DDB0229842, SLOB1, DdisK130
External Links: DictyBase Link ,
Annotation:

Classification

Group: Other
Family: Slob

Sequence

Name Sequence Type Origin Length Description Download
SLOB1.AA Protein None 585 None Fasta, JSON
SLOB1.kin_dom Protein Kinase Domain None 271 None Fasta, JSON

Protein domain

Protein domains of SLOB1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
FYVE SLOB1.AA FYVE 16-83 41 5.2e-30 105.43 Pfam 1-71 (71) Show / Hide 
Range on Protein: 16-83
Range on HMM: 1-71/71
Sequence Identity: 41% (30 aa)

AEWKPDQSSLECNDCQLPFTLI-RRRHHCRKCGSIFC--DSCSSFYSILP--IEYGYTGQQRLCRSCNNSFEQ
..|.||... .|. || |||.. |||||||.|| |||  ..|||... .|   .||.  ..| |. | .  ..
PHWQPDSEVTHCMICQKPFTFFGRRRHHCRHCGRIFCDDSKCSSHKC-IPHPPYYGWNKPVRVCD-CYDDLQK
FYVE SLOB1.AA FYVE 13-83 32 3.5e-22 80.94 SMART 1-81 (81) Show / Hide 
Range on Protein: 13-83
Range on HMM: 1-81/81
Sequence Identity: 32% (26 aa)

ISKAEWKPDQSSLEC-NDCQLPFTL-IRRRHHCRKCGSIFCDSCSSFYSILPIEYGYT--G------QQRLCRSCNNSFEQ
 .|..| ||... .|  .|. .|.. ..||||||.|| |||..|... . ||    |.  |      . | |..|. .   
ETKPHWQPDEEVDHCCMNCRKEFNFVTNRRHHCRHCGRIFCSKCCNKWIPLPYMGNYKKNGNNQNFTPVRVCDDCYEMMHH
Kinase SLOB1.AA Slob 114-376 49 8.3e-179 600.31 In-house 1-268 (268) Show / Hide 
Range on Protein: 114-376
Range on HMM: 1-268/268
Sequence Identity: 49% (132 aa)

IGHTKHGLRKSYCMAKNSMGGGEECVVSIITPTPSSCPWSMSNEKKKRKFEKTLLSLKHPYILTPIN--VEVSGANDKILVIRTFFKQGSLRDQVYKSKP
..|.....||..||.||.|..|||||.|.|...|..|||.|.|||....|.|.|.|..||||...||  ...........|||.|.|.|||.|..||.||
LDHIGWRHRKNWCMMKNDMQPGEECVQSWIDYGPDCCPWKMLNEKECQCFMKILMSCHHPYIYPVINLVFFINHKHNYCCVIRFFNKRGSLKDFIYKAKP

LSPYDTKYIYKQPKSSSSSSSSSSSSSQSQSVLPIKSIQKYCKQILESLLYLKSKGIQFSHLHLSNILINQSNDTCQLVDIENCLLGMKPLFNDYIYGIG
..|...||..||||||||||||||||...|..||.|..||||.||||.|..|.|||....|||..|..|..|||.|.|.|||||||||.|..||||....
KMPWARKYCNKQPKSSSSSSSSSSSSHKKQNGLPMKQVQKYCRQILEALIFLHSKGFPYGHLHSGNVMIDDSNDCCRLSDIENCLLGMPPFYNDYIMWHR

LPQSFKDNLEVICFGHCLFEMIIGIPLGDHSNIN----SFIPLFPDKVFLLLQQIFSEKTPTLEELVKN
. .....|..|.||||||.||..|.|...||..|    .||.||.||...|...|.....||...|...
K-IHEIENVDVYCFGHCLYEMCCGYPMQNHSVRNFPPCPFIALFCDKEHILSCEICKHCMPTMRQLLQM
Kinase SLOB1.AA Ciliate-C3 254-292 41 0.000374 11.25 In-house 103-140 (140) Show / Hide 
Range on Protein: 254-292
Range on HMM: 103-140/140
Sequence Identity: 41% (16 aa)

KQILESLLYLKSKGIQFSHLHLSNILINQSNDTCQLVDI
||||  . ||    |    . .|||||| |.|  ...| 
KQILQAIDYLHEHNIVHGDIKFSNILIN-SKDEIKIIDF