Gene 25399 (Tetrahymena)

25399

Species: Tetrahymena
Alias: 25399, 22.m00344, TTHERM_00257130, 967, PreTt25399
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-D1

Sequence

Name Sequence Type Origin Length Description Download
25399.AA Protein None 73 None Fasta, JSON
25399.kin_dom Protein Kinase Domain None 43 None Fasta, JSON
25399.NA RNA None 222 None Fasta, JSON

Protein domain

Protein domains of 25399.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 25399.AA CK1-Unclassified 31-73 39 6.5e-17 46.46 In-house 1-43 (244) Show / Hide 
Range on Protein: 31-73
Range on HMM: 1-43/244
Sequence Identity: 39% (17 aa)

LKIIKKLDQGAIGKVFQAVNLKNNEEVAIKLESTKKEKKQLQI
 ..|.|..||. | .....|...|||||||||..... .||..
YRVIEKIGQGSFGEIYKCINMQTNEEVAIKLEKKNSKHPQLCY
Kinase 25399.AA Ciliate-A9 31-69 29 1e-13 28.2 In-house 1-41 (392) Show / Hide 
Range on Protein: 31-69
Range on HMM: 1-41/392
Sequence Identity: 29% (12 aa)

LKIIKKLDQGAIGKVFQAVNLK--NNEEVAIKLESTKKEKK
.. ||....|| |.|.|.  ..  .. |.|.|    .|.|.
FEPIKIIGEGAFGCVIQCRDIQQEDKQEYAVKVIQKNKMKM
Kinase 25399.AA CK1 31-73 37 1e-12 40.29 In-house 1-45 (271) Show / Hide 
Range on Protein: 31-73
Range on HMM: 1-45/271
Sequence Identity: 37% (17 aa)

LKIIKKLDQGAIGKVFQAVNLKNNEE--VAIKLESTKKEKKQLQI
 ....|..||. | .... |..|.||  ||||||. |..  ||..
YRVGRKIGQGSFGDIYLGINMTNGEENHVAIKLEKNKSKHPQLHY
Kinase 25399.AA CK1 31-72 28 1.2e-11 36.98 In-house 1-53 (339) Show / Hide 
Range on Protein: 31-72
Range on HMM: 1-53/339
Sequence Identity: 28% (15 aa)

LKIIKKLDQGAIG-KVFQA-----VNLKNN-----EEVAIKLESTKKEKKQLQ
 |..||...|. |  .. .     ...|||     ||.|.|.|. | .... |
WKVVKKIGEGGFGYQIYKVQKEDHKDMKNNKPYKGEEYAMKVEPKKSMGQHPQ
Kinase 25399.AA CK1-D 32-73 42 9.6e-09 26.81 In-house 2-43 (261) Show / Hide 
Range on Protein: 32-73
Range on HMM: 2-43/261
Sequence Identity: 42% (18 aa)

KIIKKLDQGAIGKVFQAVNLKNNEEVAIKLESTKKEKKQLQI
.| .|.  |. | ..   |...|||||||||. | .  ||.|
RIGRKIGSGSFGDIYHGTNIQTNEEVAIKLECIKTKHPQLHI
Kinase 25399.AA MST 32-61 40 1.8e-08 22.99 In-house 2-31 (254) Show / Hide 
Range on Protein: 32-61
Range on HMM: 2-31/254
Sequence Identity: 40% (12 aa)

KIIKKLDQGAIGKVFQAVNLKNNEEVAIKL
 |. || ||. |.|..|........||||.
DIVEKLGQGSYGSVYKAIHKQTGKIVAIKM
Kinase 25399.AA TTBK 32-73 37 2e-08 25.9 In-house 2-44 (257) Show / Hide 
Range on Protein: 32-73
Range on HMM: 2-44/257
Sequence Identity: 37% (16 aa)

KIIKKLDQGAIGKVFQAVNLKNN-EEVAIKLESTKKEKKQLQI
|..||  .|. | ...| .. |. |.||||.|| .. |  |..
KVVKKIGGGGFGEIYEAKDMINHHEQVAIKVESAQQPKQVLKM
Kinase 25399.AA CK1-A 32-71 40 5.1e-08 24.25 In-house 2-41 (261) Show / Hide 
Range on Protein: 32-71
Range on HMM: 2-41/261
Sequence Identity: 40% (16 aa)

KIIKKLDQGAIGKVFQAVNLKNNEEVAIKLESTKKEKKQL
....|.  |. | .. ..|..| ||||||.|| |    ||
RLVRKIGSGSFGDIYLGINITNGEEVAIKMESNKARHPQL
Kinase 25399.AA CMGC 31-60 29 1.4e-07 19.97 In-house 1-44 (513) Show / Hide 
Range on Protein: 31-60
Range on HMM: 1-44/513
Sequence Identity: 29% (13 aa)

LKIIKKLDQGAIGKVFQAVN--------------LKNNEEVAIK
 .||||. .|. |.|.....               ..||.||||
YEIIKKIGEGTYGVVYKCRDKRTNQKKDNGQAHHHETNEIVAIK
Kinase 25399.AA NuaK 32-61 40 1.7e-07 15.21 In-house 2-31 (252) Show / Hide 
Range on Protein: 32-61
Range on HMM: 2-31/252
Sequence Identity: 40% (12 aa)

KIIKKLDQGAIGKVFQAVNLKNNEEVAIKL
...|.| .|  ||| .|.. .   |||||.
EFQKTLGKGTYGKVKLATEHSTGREVAIKS
Kinase 25399.AA Pkinase 31-73 23 1.6e-05 20.63 Pfam 1-43 (293) Show / Hide 
Range on Protein: 31-73
Range on HMM: 1-43/293
Sequence Identity: 23% (10 aa)

LKIIKKLDQGAIGKVFQAVNLKNNEEVAIKLESTKKEKKQLQI
..|..|. .|. |.|..... .....||.|  . ..||.. ..
YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQ