Gene n1175 (Tetrahymena)

n1175

Species: Tetrahymena
Alias: 1175, n.m0002, n1175
External Links:
Annotation:

Classification

Group: Other
Family: Ciliate-C7

Sequence

Name Sequence Type Origin Length Description Download
n1175.AA Protein None 173 None Fasta, JSON
n1175.NA RNA None 519 None Fasta, JSON
n1175.kin_dom Protein Kinase Domain None 63 None Fasta, JSON

Protein domain

Protein domains of n1175.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase n1175.AA Ciliate-C7 104-173 64 2e-39 124.36 In-house 1-70 (164) Show / Hide 
Range on Protein: 104-173
Range on HMM: 1-70/164
Sequence Identity: 64% (45 aa)

FRFLGQGAQGLVVLPKEKSTNKRYAIKRIDIKDSNDNVDQVILGQVQQEIKMLNQCKGSPYVVNLLHQIE
|||||||.||||.| |...|| ||||| . ..|...|.|| |..||||||..|.|||.|||||.||||.|
FRFLGQGQQGLVLLAKDQKTNMRYAIKGVQVRDKQGNIDQDINNQVQQEINILKQCKDSPYVVCLLHQFE
Kinase n1175.AA AGC 104-168 23 1e-13 30.34 In-house 1-96 (395) Show / Hide 
Range on Protein: 104-168
Range on HMM: 1-96/395
Sequence Identity: 23% (23 aa)

FRFL---GQGAQGLVVLPKEK------STNKRYAIKRIDIKD---SND--NVDQVILGQ-------VQQEIKMLNQCKG---------SPYVVN-L
|.||   |.|. | | | ..|      .|.| ||.| .. |.    ..   |....  .       |..| ..| .|..         .|..|. |
FEFLKVIGKGSFGKVYLVRKKDGCHKKDTGKYYAMKVLKKKHKIVIKKKNMVEHTMTEHWKQDQGYVWEERNILEKCNHTHNHPIKSHHPFIVKIL
Kinase n1175.AA CAMK 106-173 20 2.3e-11 32.15 In-house 1-108 (425) Show / Hide 
Range on Protein: 106-173
Range on HMM: 1-108/425
Sequence Identity: 20% (22 aa)

FLGQGAQGLVVLPKEKSTN------------KRYAIKRIDIKDSNDNV----------------------DQVILGQVQQEIKMLNQCKG------SPYV
 ||.|. | | | ..|.|.            ...||| || |   |..                      ... . .|..||.......|       | .
TLGRGSFGKVKLCIHKNTTGKERVHHIYTNGQKVAIKIIDKKKLKDKQNQDYSNCYKIDKSKCKHRYCWRRPKDRKNVRREIEIMKKLQGIGNKLDHPNI

VNLLHQIE
..|.. .|
IKLYEVYE
Kinase n1175.AA STE 101-169 18 2e-10 33.14 In-house 1-96 (359) Show / Hide 
Range on Protein: 101-169
Range on HMM: 1-96/359
Sequence Identity: 18% (18 aa)

CDEFRFLGQGAQGLVVLPKEK------STNKR---------YAIKRIDIKDSN-----------DNVDQVILGQVQQEIKMLNQCKG-SPYVVNLL
 .  ...|.|| | |.. . .      .|..          .|||.......|           .|... .. |...|||....|.  .|..|. .
WEGIEKIGKGAFGTVYKAMNHKNCNIHKTGEVENNGETGEIMAIKQMNLENCNNKDENQENQELENKNHEEMQQILKEIKIMKKCNHMHPNIVKYY
Kinase n1175.AA Ciliate-A2 108-160 32 6.3e-10 30.94 In-house 1-56 (272) Show / Hide 
Range on Protein: 108-160
Range on HMM: 1-56/272
Sequence Identity: 32% (18 aa)

GQGAQGLVVLPKEK--STNKRYAIKRIDIKDSNDN-VDQVILGQVQQEIKMLNQCK
|||. |.|.. ...    |. |||| ..| |..|  ..|  | . . |.. |  |.
GQGCFGCVIFVEHMDNHNNEKYAIKIQSIIDGIDQKISQQKLQECKHEAQFLKNCN
Kinase n1175.AA STE20 107-169 28 7.5e-09 28.78 In-house 7-70 (288) Show / Hide 
Range on Protein: 107-169
Range on HMM: 7-70/288
Sequence Identity: 28% (19 aa)

LGQGAQGLVVLPKEKSTNKR----YAIKRIDIKDSNDNVDQVILGQVQQEIKMLNQCKGSPYVVNLL
.|||. | | .  .|.|..     .|||...... ..   |  .  .|.|| ...||| .|..|. .
IGQGSYGKVYKAYHKPTGEYCNQRVAIKKMNLEKCDNE--QDEWEDIQKEISIMKQCK-HPNIVKYY
Kinase n1175.AA Ciliate-E9 105-168 34 9.1e-09 23.75 In-house 5-65 (298) Show / Hide 
Range on Protein: 105-168
Range on HMM: 5-65/298
Sequence Identity: 34% (22 aa)

RFLGQGAQGLVVLPKEKSTNKRYAIKRIDIKDSNDNVDQVILGQVQQEIKMLNQCKGSPYVVNL
|  .|| || |.|   . | |.||||    .  ||  .   .  .| |.. ||| .. .|.. |
RNIAQGTQGQVKLAIDMQTRKKYAIKIMKHQQMNDEMF---FKYFQREMNILNQVQPHRYIIQL
Kinase n1175.AA ULK 105-170 24 1.5e-07 22.55 In-house 5-85 (329) Show / Hide 
Range on Protein: 105-170
Range on HMM: 5-85/329
Sequence Identity: 24% (20 aa)

RFLGQGAQGLVVLPKEKST----NKRYAIKRIDIK-DSNDNVD---QVILGQVQQEIKMLNQCK---GSPY----VVNLLH
. ||.|. | |   . | |    |. .|.| ||..  ...| .   |... ....||| . . |   ....    .| |..
HCLGKGSFGKVYKGRNKKTKDYVNEKVACKMIDKQKMNQKNNEQEGQYMWQLLKNEIKIMKKLKSPNRHKNHHPNIVKLYD
Kinase n1175.AA PEK 101-140 31 1.9e-07 21.18 In-house 1-41 (655) Show / Hide 
Range on Protein: 101-140
Range on HMM: 1-41/655
Sequence Identity: 31% (13 aa)

CDEFRFLGQGAQ-GLVVLPKEKSTNKRYAIKRIDIKDSNDN
  | . ||.|.. | |.  ..|   ..|||||| .......
FEEIQCLGKGGFGGQVYKVQNKLDGCYYAIKRIKLNWKQRK
Kinase n1175.AA ULK 105-170 25 2.7e-07 21.99 In-house 5-82 (324) Show / Hide 
Range on Protein: 105-170
Range on HMM: 5-82/324
Sequence Identity: 25% (20 aa)

RFLGQGAQG-LVVLPKEKST---NKRYAIKRIDIK-DSNDNVD---QVILGQVQQEIKMLNQCK--GSPY--VVNLLH
. ||.|. |  |   . | |   |. .|.| ||.|  .... .   |... . ..||. . . |   .|.  .| |..
HCLGKGSFGVKVYKGRNKKTNTQNQYVACKMIDKKKMNKKKNEQEGQYMWQLLKNEIQIMKKLKELKHPNHHIVKLYD
Kinase n1175.AA Pkinase 101-170 26 4.2e-07 26.21 Pfam 1-67 (293) Show / Hide 
Range on Protein: 101-170
Range on HMM: 1-67/293
Sequence Identity: 26% (19 aa)

CDEFRFLGQGAQGLVVLPKEKSTNKRYAIKRIDIKDSNDNVDQVI--LGQVQQEIKMLNQCKGSPYVVNLLH
    | .|.|. | | . ..|.|.|..|.|.|. .. ....||    |    .||.... . ..|..| |..
YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRL----SEIQIMKRL-NHPNIVRLYD